| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1881 |
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| Symbol | |
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| ID | 1169647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1977241 |
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| End bp | 1978323 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343771 |
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| Product | HlyD family-like protein |
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| Protein accession | NP_717489 |
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| Protein GI | 24373446 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCATAATTAT CATCGCCATT TTGGCTGCGG CATGGTTTGG ATATCAAGCT
ATGCAGCCGC AAGAACAGGC GAAAGTGCAA GTTAAGCTCC CCCCTAATGT CGTTATTGCC
GCCGCTGCCA TGGCGCAAGT GCGTGACGAG GTTGAAGCTA TCGGCACAAA TAAGGCTTAC
GAATCCGTTA CGATTACACC TAAAGTTACC GACGTTGTGA CCTCATTAAA GTTTGATGAT
GGCGATATCG TTAAAAAAGG TGATTTATTG GTGCAACTGC AAAATGCAGA GCAACTGGCC
AAAGTGAAAG TGGCGCAGGT TAAAGTGAGT GATAACCAGC GCGAATTAGC GCGGATTAGT
TCGCTCGTCA CCAGTCGCAC TGTGGCGGAA TTAGAACGTG ACCGCCTGCA AACCTTAATT
GATACTACCC GTGCTGAATT AGAGCAGGCA CAATCCTCCC TTAATGATCG CAGTATTGTC
GCGCCTTTTA ATGGGCGTTT AGGGTTACGC CAAGTGAGTG TCGGTAGCTT AGTCACACCG
GGTACAGAGA TCAGCACTCT TGATGATATC TCTAAGATTA AATTAGACTT TTCAGTGCCT
GAGCGCTTTA TTCAAGAGCT ACAACCCGGC AAGCTTGTTG AAGCAAAAGC CGTGGCGTTT
CCCGATGAAA TCTTTAAAGG CAAAGTGATT TCTATCGATA GCCGTGTCAA CCCAACGACC
CGTGCCGTGA TCGTGCGCGC CGAAATCCCA AATCATGATT TACGCTTACT GCCCGGGATG
CTGATGAAGG TGAAACTCAT CAAACGCAGC CGCGAGGCGC TGATGTTGCC TGAATCGGCG
ATTATTCCGA TTCAGAAATC ACATTTTGTT TACAGCGTGA ATAAAGACAA TGTCATCGAG
CGTAAGCAAG TCACCATTGG TATTCGTACT CGGGGTTGGG TCGAAATTAC CGATGGCCTA
GCGATTGGCG AAAACGTGGT GATCCGTGGG TTGCTTAAGG TGCACCCTGG TGATGTGGTG
AATACCCAAC TGGCTGAAAA GTTTAGCTAT CTTTCCGATG CTACTGCGGA GCCAAGCGTA
TGA
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| Protein sequence | MKKIIIIIAI LAAAWFGYQA MQPQEQAKVQ VKLPPNVVIA AAAMAQVRDE VEAIGTNKAY
ESVTITPKVT DVVTSLKFDD GDIVKKGDLL VQLQNAEQLA KVKVAQVKVS DNQRELARIS
SLVTSRTVAE LERDRLQTLI DTTRAELEQA QSSLNDRSIV APFNGRLGLR QVSVGSLVTP
GTEISTLDDI SKIKLDFSVP ERFIQELQPG KLVEAKAVAF PDEIFKGKVI SIDSRVNPTT
RAVIVRAEIP NHDLRLLPGM LMKVKLIKRS REALMLPESA IIPIQKSHFV YSVNKDNVIE
RKQVTIGIRT RGWVEITDGL AIGENVVIRG LLKVHPGDVV NTQLAEKFSY LSDATAEPSV
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