| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1879 |
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| Symbol | dapA |
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| ID | 1169645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1974639 |
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| End bp | 1975523 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637343769 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | NP_717487 |
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| Protein GI | 24373444 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACGCCAATGA ACAGTGATGG CTCAGTAGAT
TTTGCAAGTC TTGAAAGGTT AGTCGAATTC CATATTGACC AAGGCACAGA CGCCATTGTT
GCCGTGGGAA CCACCGGCGA GTCAGCGACT CTGCCAATGA ATGAGCACGT TACCGTGGTG
GCGCAAACCG TTAAGTTTGC GGCAGGCCGT ATTCCTGTGA TTGGTGGCAA CGGTGCTAAT
GCGACAGCAG AAGCTATCGA ACTGACCAAG TCCTTATCTA AAGTGGGGGT TGCGGCCATG
TTAGGCGTAA CACCTTACTA CAATAAACCC ACTCCAAAGG GCTTAGTTGC ACACTATAAA
GCTGTCGCGG CAAGCACTGA TATTCCACAA ATTCTGTATA ACGTTCCTGG ACGCACCGCC
GTTGATATGA AGCCCGAAAC TGTGGCTGAA TTAGTGAGCG TGAGCAATAT TATTGGCGTA
AAAGAAGCAA CGGGCGACGT ATCTCGCGTT AAACGCCTAC GTGAGCTTTG TGGTAATGAC
TTTATGTTGT ATAGCGGTGA TGACGCGACA GCAAGCGAGT TTTTACTCTT GGGTGGTAAT
GGGGTGATTT CTGTTGCCAA CAACATAGTG CCAAAAGCCT TTAAAGCCAT GTGCGACGCT
GCGCTTGCGG GCAATGCCGA ATTAGCCGCA AGCATCGACG AACCACTACG TGGTCTGTAT
AGCACACTGT TTTGCGAAGC AAACCCGATC CCTGTTAAAT GGGCGGCCCA TCGTATGGGG
CTGATTGAAT GTGGTCATAT TCGTTTACCT TTGACTGAAC TTTCTGAGCA ATGTCATGGT
CTGTTGTTAG AGGCAATGAC TCGTGCCCAG ATAGAGGTTA AATAA
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| Protein sequence | MINGSIVALI TPMNSDGSVD FASLERLVEF HIDQGTDAIV AVGTTGESAT LPMNEHVTVV
AQTVKFAAGR IPVIGGNGAN ATAEAIELTK SLSKVGVAAM LGVTPYYNKP TPKGLVAHYK
AVAASTDIPQ ILYNVPGRTA VDMKPETVAE LVSVSNIIGV KEATGDVSRV KRLRELCGND
FMLYSGDDAT ASEFLLLGGN GVISVANNIV PKAFKAMCDA ALAGNAELAA SIDEPLRGLY
STLFCEANPI PVKWAAHRMG LIECGHIRLP LTELSEQCHG LLLEAMTRAQ IEVK
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