Gene SO_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1867 
Symbol 
ID1169635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1959024 
End bp1959692 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content48% 
IMG OID637343759 
Producthypothetical protein 
Protein accessionNP_717475 
Protein GI24373432 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCA CGTTACACGA AGCCAGAGTT ATCGGATGCC TACTTGAAAA AGAAGTCACC 
ACCCCCGAGC AATATCCGCT GTCACTCAAT GCACTGACCC TCGCCTGTAA TCAAAAAACC 
AGCCGTGAAC CTGTATTAGA ACTCACTGAA GCGCAAGTAC AAGACGCCCT TGATTCATTA 
AATAAAAAGC GCTTAATCAG CGAACAATCG GGTTTTGGTA GCCGAGTCGT CAAATATAAG 
CACAGATTCT GCAATACTGA ATTTAGCGAG TTACAACTTT CAACTGCGGC CGTGGCGATT 
GTCTGTTTGC TGCTGCTTCG CGGCCCACAA ACCCCAGGTG AATTACGTAC CCGCAGCAAC 
AGGTTGCATG ACTTTAAAGA TGTACTCGAA GTGGAAGCCT GCATTAAGCA ACTGATGGAG 
CGGGATAAAC CCGTGCTAAC CCAACTGCCA CGGGAGCCGG GCAAGCGCGA ATGCCGTTAT 
ACTGAGCTGT TTTCTCAAGG CTCAGAGCAG GTTAGCGCAA CGTCACTCTC CGCCGATTCG 
CCGAGTGCTG ACTCAAACTC ACTAAATGCT CAAGATAGAC AACAACTGGA AGCGAGAGTC 
ACACAGCTTG AAGGGCAAGT GGCTGAACTT AAAGATAAGT TAGAATCGCT TATCGCTTCT 
TTATCGTAA
 
Protein sequence
MELTLHEARV IGCLLEKEVT TPEQYPLSLN ALTLACNQKT SREPVLELTE AQVQDALDSL 
NKKRLISEQS GFGSRVVKYK HRFCNTEFSE LQLSTAAVAI VCLLLLRGPQ TPGELRTRSN 
RLHDFKDVLE VEACIKQLME RDKPVLTQLP REPGKRECRY TELFSQGSEQ VSATSLSADS 
PSADSNSLNA QDRQQLEARV TQLEGQVAEL KDKLESLIAS LS