Gene SO_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1865 
Symbol 
ID1169633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1957195 
End bp1958103 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content48% 
IMG OID637343757 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_717473 
Protein GI24373430 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTCG TTCAGTGCCA AGGTCTTTCC AAACACTATG GCAACAAAAA AGCACTCAAT 
AACGTGAGTT TAACCCTCGA AGCGGGTGCG CCCATCGCTT TGGTTGGCCC TAATGGCGCG 
GGTAAAACCA CGCTGTTTAG CCTGCTCTGT GGTTACCTTA CCCCAAGCGC GGGCACAGTT 
CGTATTCTGG GAGAGGCGCC GAATAGTCCG ACATTATTAG GGCAAATTGC CGCCCTTCCC 
CAAGATGCGA CCCTTGATCC TAATTTAACC ATTATCAGCC AGTTAAGCTT CTTTGCGCGT 
CTTCAAGGGA TGGATAGCAA GCAGGCAAAT CAAGAAGCCC TGCGTGTGCT GAATTTAGTG 
GACTTAGCCG AAGTGGCGCA GCAAAAGCCA CCAAGTCTTA GCCATGGCAT GAGTAAACGT 
GTAGCGATTG CCCAAGCCTT AATCGGCTCG CCTAAGCTGG TATTGTTAGA TGAACCCACC 
GCGGGACTCG ATCCGGCCAA TGCGAAGAAA ATCCGTGAAC TTGTCAGAAT CCTCTCGCCC 
ACCACGACCT TTGTAATTAG CTCACATAAT TTGGATGAAC TCGAAAAGCT CTGCGACCAA 
GTACTGTATT TGGATAAAGG TGAACTAAGC CAATCGATTT CGATGCGCTC ATCCAATAGC 
GGCAGTGATT ATCTCACCCT CACCATGCAA AGCTGCGATA GTGAAGCGCT AATCCAAGCC 
GTAGGTCAAA TAGCTGGTGT GGTGAATATC ACCTCAAAAC AAGCCCATGT GTTTGTGATC 
CAATTGGATG ACACGGCAAA CCGACATTAT GAATTTGAAA CCGCCCTGCT CGCCCTATTT 
AAGCAACAGC ATTGGCAATA TAAGATGCTG CTTAAAGGAC GTACATTAGA AGAAACATTA 
TTCTCGTAA
 
Protein sequence
MILVQCQGLS KHYGNKKALN NVSLTLEAGA PIALVGPNGA GKTTLFSLLC GYLTPSAGTV 
RILGEAPNSP TLLGQIAALP QDATLDPNLT IISQLSFFAR LQGMDSKQAN QEALRVLNLV 
DLAEVAQQKP PSLSHGMSKR VAIAQALIGS PKLVLLDEPT AGLDPANAKK IRELVRILSP 
TTTFVISSHN LDELEKLCDQ VLYLDKGELS QSISMRSSNS GSDYLTLTMQ SCDSEALIQA 
VGQIAGVVNI TSKQAHVFVI QLDDTANRHY EFETALLALF KQQHWQYKML LKGRTLEETL 
FS