Gene SO_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1848 
Symbol 
ID1169617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1937409 
End bp1938167 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content42% 
IMG OID637343731 
Producthypothetical protein 
Protein accessionNP_717456 
Protein GI24373413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGA GTCTGATTGA GATAACCGTT GCCGAGATTA AAGAGCTCGC CGATGTCGAG 
CCAAAACAGG CTAGCAAACG TTTCGAACTC ATCGCCACCA CAATGAACGA TGAACAATTA 
GTCGAAGTGA TTGAAAAAAT GGATATTGTG ACACTGACTC AGATCAACAG TCACCATGAT 
ATCTCCTGCC CTTCGATCAT GTCGGAGCTG ATGACTCCTG AGCAAATTCG CGACATCGTC 
TGTCAGCAAC CTTTGTACTG GGAAGAAAAA ATCAAAAACA ATGCCGAAGA ACTCATTCAG 
CATACCTTTG ATTTTTTAAC TTATTTAATT CGTATTCAAG ATAGCGAAGA AAAACAAACT 
GCCATTTTAG AATGCATTGC CGAAGATCCT GCTGGCCTCT TCTATTTGTC TATCCCCTTT 
ATCGAAATGA TGTTGGGTGA AGGACACGAC GATGAGGATC ATATCAATGA CTACTACGAC 
GATGAAGAAG ATACCGACAC CATCGGTTAC GACAGCCGTG TCGCCAGTGA AGAAGCCCAT 
AGCTTTAGCC TAGATGACCC CCGTAGTCTG ATGGCGTTAA TCCATGAGCT GGCACCCGAT 
GTTGAAAAAG CCATTAAAAA CCTGCTGCGT AACGAAAGCT CTGGTTGGGA AACGATCATT 
AACAAGTTCG TTAATGAATT AGTTATCCAA GCGAAAGAGA AAAACCAAGT TACGGATGAA 
TACGCAGAAG TGGATGATAT GTTTAGCTTT TTAGATTAA
 
Protein sequence
MNTSLIEITV AEIKELADVE PKQASKRFEL IATTMNDEQL VEVIEKMDIV TLTQINSHHD 
ISCPSIMSEL MTPEQIRDIV CQQPLYWEEK IKNNAEELIQ HTFDFLTYLI RIQDSEEKQT 
AILECIAEDP AGLFYLSIPF IEMMLGEGHD DEDHINDYYD DEEDTDTIGY DSRVASEEAH 
SFSLDDPRSL MALIHELAPD VEKAIKNLLR NESSGWETII NKFVNELVIQ AKEKNQVTDE 
YAEVDDMFSF LD