Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1840 |
Symbol | |
ID | 1169610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1929855 |
End bp | 1930928 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343724 |
Product | hypothetical protein |
Protein accession | NP_717448 |
Protein GI | 24373405 |
COG category | [S] Function unknown |
COG ID | [COG4984] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCAATC TTACATCTCA AGTTTATGAG TGGCTGGATC AGGGACATAT CACTCGGGCG CAGGTAGATG AATTGTACCG CCACGTTTGC ACACCACCGA GTGCCGCCAG TTGGCGAAGC TTAATTGCTC AGCTTTTACA GTGGGCGGGA GCGTTAAGCT TAGCGACAGG AATTATCTTC TTTTTTGCCT ATAACTGGCA GTCCCTCAAC CGAATAAGCA AATTTGCTCT GATCGAAGTG GCACTTTTGC TCAGTCTTGT TTGTTTTGTG TGGCTTTATT ATCGAGGTTC GTCGCAACAG CAGAGTTCAG CCTCCCACAG TATGTTTGGG GCTACACTTG CGAATGTGGC ACTGTTGGTG GCGAGCATCT TAATTGGTGG GCTTTTAGCG CTGGTGGGAC AAACCTACCA AACGGGAGCC GATCCTTGGC AGTTATTCGC GCTCTGGGCC TTAGCGATTA TCCCCTTGGC TTGGGTGGCA GGCTTCGATG GTTTATGGTT GTTATTACTC GGTTTAGTTA ATTTAAGCCT TGGGCTTTTT GCCGATACAT CATCGTACCT GCTGGATGAA AGGGATCAGA TCTGGTTATT TATCTTCGTA GTACTCAATC TTACTTTTTA TTACGCCTTT GTGTTTTTGG GGAGTTTGCC CAGTAAGCGT TGGCATGCGC CCCTTATGCA GTATGTAAGC TCTCTCGCGG CGATGGGGTG TTTTACATTA TTAATTTGTT GGATGATTTT CGATACCGTT GATAATAAAA AGTTTATTTT TGGCATTTGG GCGGTGTATT TAATCCATCT TATCTTTGGA TTCTGGTGGT TCAGGTACAG ATTATTACAG GTTTACCCGT TGGCATTGGG CGGTTTTAGT TTAATCGCTG TCGGGGCGGC GTTACTCACC GAACTGCTAT ATAAAGATAG CGATCCTATA GGGGGGTTTT TGTTGATTGG ACTCTACATT ATTTTGGCCA GCACTGGTTT GAGTTCAATG TTGCGACGAT TGCATCGGCA GTTTAAGAGC GAAGTTGCCG CTAGCGAAAT GTCTGCAATC AATGAGCAAG GAGCCGCGTC ATGA
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Protein sequence | MRNLTSQVYE WLDQGHITRA QVDELYRHVC TPPSAASWRS LIAQLLQWAG ALSLATGIIF FFAYNWQSLN RISKFALIEV ALLLSLVCFV WLYYRGSSQQ QSSASHSMFG ATLANVALLV ASILIGGLLA LVGQTYQTGA DPWQLFALWA LAIIPLAWVA GFDGLWLLLL GLVNLSLGLF ADTSSYLLDE RDQIWLFIFV VLNLTFYYAF VFLGSLPSKR WHAPLMQYVS SLAAMGCFTL LICWMIFDTV DNKKFIFGIW AVYLIHLIFG FWWFRYRLLQ VYPLALGGFS LIAVGAALLT ELLYKDSDPI GGFLLIGLYI ILASTGLSSM LRRLHRQFKS EVAASEMSAI NEQGAAS
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