Gene SO_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1840 
Symbol 
ID1169610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1929855 
End bp1930928 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content46% 
IMG OID637343724 
Producthypothetical protein 
Protein accessionNP_717448 
Protein GI24373405 
COG category[S] Function unknown 
COG ID[COG4984] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCAATC TTACATCTCA AGTTTATGAG TGGCTGGATC AGGGACATAT CACTCGGGCG 
CAGGTAGATG AATTGTACCG CCACGTTTGC ACACCACCGA GTGCCGCCAG TTGGCGAAGC
TTAATTGCTC AGCTTTTACA GTGGGCGGGA GCGTTAAGCT TAGCGACAGG AATTATCTTC
TTTTTTGCCT ATAACTGGCA GTCCCTCAAC CGAATAAGCA AATTTGCTCT GATCGAAGTG
GCACTTTTGC TCAGTCTTGT TTGTTTTGTG TGGCTTTATT ATCGAGGTTC GTCGCAACAG
CAGAGTTCAG CCTCCCACAG TATGTTTGGG GCTACACTTG CGAATGTGGC ACTGTTGGTG
GCGAGCATCT TAATTGGTGG GCTTTTAGCG CTGGTGGGAC AAACCTACCA AACGGGAGCC
GATCCTTGGC AGTTATTCGC GCTCTGGGCC TTAGCGATTA TCCCCTTGGC TTGGGTGGCA
GGCTTCGATG GTTTATGGTT GTTATTACTC GGTTTAGTTA ATTTAAGCCT TGGGCTTTTT
GCCGATACAT CATCGTACCT GCTGGATGAA AGGGATCAGA TCTGGTTATT TATCTTCGTA
GTACTCAATC TTACTTTTTA TTACGCCTTT GTGTTTTTGG GGAGTTTGCC CAGTAAGCGT
TGGCATGCGC CCCTTATGCA GTATGTAAGC TCTCTCGCGG CGATGGGGTG TTTTACATTA
TTAATTTGTT GGATGATTTT CGATACCGTT GATAATAAAA AGTTTATTTT TGGCATTTGG
GCGGTGTATT TAATCCATCT TATCTTTGGA TTCTGGTGGT TCAGGTACAG ATTATTACAG
GTTTACCCGT TGGCATTGGG CGGTTTTAGT TTAATCGCTG TCGGGGCGGC GTTACTCACC
GAACTGCTAT ATAAAGATAG CGATCCTATA GGGGGGTTTT TGTTGATTGG ACTCTACATT
ATTTTGGCCA GCACTGGTTT GAGTTCAATG TTGCGACGAT TGCATCGGCA GTTTAAGAGC
GAAGTTGCCG CTAGCGAAAT GTCTGCAATC AATGAGCAAG GAGCCGCGTC ATGA
 
Protein sequence
MRNLTSQVYE WLDQGHITRA QVDELYRHVC TPPSAASWRS LIAQLLQWAG ALSLATGIIF 
FFAYNWQSLN RISKFALIEV ALLLSLVCFV WLYYRGSSQQ QSSASHSMFG ATLANVALLV
ASILIGGLLA LVGQTYQTGA DPWQLFALWA LAIIPLAWVA GFDGLWLLLL GLVNLSLGLF
ADTSSYLLDE RDQIWLFIFV VLNLTFYYAF VFLGSLPSKR WHAPLMQYVS SLAAMGCFTL
LICWMIFDTV DNKKFIFGIW AVYLIHLIFG FWWFRYRLLQ VYPLALGGFS LIAVGAALLT
ELLYKDSDPI GGFLLIGLYI ILASTGLSSM LRRLHRQFKS EVAASEMSAI NEQGAAS