Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1833 |
Symbol | |
ID | 1169605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1925479 |
End bp | 1926801 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343719 |
Product | ISSod7, transposase |
Protein accession | NP_717441 |
Protein GI | 24373398 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACTCT CAGAAGCACT TGCTCGCACT CATATTACCC GCCTAACCGA ATTCACCTGC CTCGCTGATG TGTTAGAGCC TGAGTTAATT CAATCCTGTT TAGACTCACA AGGCGTTGCT ACTCTCAGAC GACGCAAATT GCCGATGGAC GCGATGATTT GGGCCGTTAT CGGAATGGCC TTGTTCCGAG GGGAGTCTGT TCGGTCACTC ATCAACAAAC TCGACATTGT TTTGCCGCAA GAGATTGATT ATGTTGCCCG TAGTGCCGTG ACTCAGGCGC GTAAACGATT AGGCAGTGAG GTCGTTCGAG AAGTGTTCAG CCGTAGCGCG AATACCTGGC ACGCGAGAGC CGAACACCCT CATTGGTGTG GTCTGAACCT GTATGGCGTC GATGGTGTGG TGTGGCGGAC ACCCGATAGT GTTCAAAATC AAGCAGCCTT TGGACGAACC GCCAACGCTT CCGGCGAAGC GGCTTATCCG CAAATTCGCA TGGTTTGCCT GATGGAGTTA AGCAGCCATT TGTTGGTCAA CAGCGCCTTT GATTCGGTTG TCGAAAATGA AATGAACTTA GCCTCTCAGC TCATTTCTAG CATCCCCAAT CACAGTCTAA CCCTATTTGA CCGAGGATTT TATTCGCTCG GCCTGCTGCA CGCTTGGCAG CAAGCACAAC CTAATAGCCA CTGGTTGTTG CCATTGAAGA AAGGCACTCA ATATGAGGTG GTTAGAACGC TGGGAAAACA TGACCAGTGG GTGAAACTCA CCACCACGCC TCAAGCAAGA AAGAAATGGC CGCAGCTCCC TGACACCCTT GAAGCGCGCT TACTGACTAA GACGGTGAAA GGTAAGTCAG TCGCCATATT GACCTCGTTA ACAGACCCAA TGCGTTACCC AAGTGAAGAC ATCGTCGACT TATATGCCCA TCGTTGGGAA ATCGAACTGG GCTACAGAGA GATGAAACAA CATTTACTGG AGAGCCGTTT TACGCTCCGC AGCCAACTGC CTGAGCTGGT GTTCCAAGAG CTATGGGGGG TGCTACTGGC CTACAATCTC ATTAGATACA AGATGTTACT GATGGCCAAA AGCTTACCAT CGGTTCATCC CAATCAACTG AGTTTTCGTG ATGCAGCGAG TCATATCATC TTCAAGTTGA CACAGTTGTC ATCACAAACG CCGGGAAATG TTCCCAGAGA CGTATTGGAT ATAGAACGCA ATGCACGACA ATTTAAATTG GATGGTAAAC GGGAAAGGGC TTATCCAAGG ATCCTTAAAA TGAGCAAAAA TAAGTTTCCG GTTAGATCAA AGAAAAATGC CGTTCACTCT TAA
|
Protein sequence | MQLSEALART HITRLTEFTC LADVLEPELI QSCLDSQGVA TLRRRKLPMD AMIWAVIGMA LFRGESVRSL INKLDIVLPQ EIDYVARSAV TQARKRLGSE VVREVFSRSA NTWHARAEHP HWCGLNLYGV DGVVWRTPDS VQNQAAFGRT ANASGEAAYP QIRMVCLMEL SSHLLVNSAF DSVVENEMNL ASQLISSIPN HSLTLFDRGF YSLGLLHAWQ QAQPNSHWLL PLKKGTQYEV VRTLGKHDQW VKLTTTPQAR KKWPQLPDTL EARLLTKTVK GKSVAILTSL TDPMRYPSED IVDLYAHRWE IELGYREMKQ HLLESRFTLR SQLPELVFQE LWGVLLAYNL IRYKMLLMAK SLPSVHPNQL SFRDAASHII FKLTQLSSQT PGNVPRDVLD IERNARQFKL DGKRERAYPR ILKMSKNKFP VRSKKNAVHS
|
| |