Gene SO_1828 details

Gene Information

• Locus tag: SO_1828
• Symbol: tonB2
• ID: 1169600
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 1920583
• End bp: 1921206
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637343714
• Product: TonB2 protein
• Protein accession: NP_717436
• Protein GI: 24373393
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0810] Periplasmic protein TonB, links inner and outer membranes
• TIGRFAM ID: [TIGR01352] TonB family C-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAGAG CACTAGTATC GATCATTATT GGTGCTGCTG TGACTTTGGG ATTGTTCTGG 
TTTATGGCTT TTCTGGTCGG GGGCGGCGCA CAGCGCGCCG AAACCTCAGC CGAGACTCCA 
GTGATTGAAA TCACCATGGA CAGACAGGAT TCAAAAGCGC AGAGCAAACA AAGGGTCGTA 
CCTCAACCTC CGCCACCACC AGCACAGCCT GAGAAGCCTC AAGCTGCGCC GCCAGAAACG 
TCATCAAATA TTGATACGGC AATGTCGTTC AATATGGGGG GCGTGGAAGC GGGTGGTCAT 
AGTGCCGGTG GCTTCAAACT GGGTAATATG ATGAGCCGTG ACGGAGATGC GACCCCAATC 
GTTCGTATCG AGCCACAATA TCCAATCGCA GCAGCACGTG ATGGCAAAGA AGGTTGGGTA 
CAATTGCGCT TTACCATTAA CGAGTTAGGT GGTGTTGAGG ACGTAGAAGT TATTCAAGCT 
GAACCTAAGC GTTTATTCGA TAAAGAAGCC ATCCGTGCGC TGAATAAGTG GAAATACAAG 
CCAAAGATTG TTGATGGTAA GCCACTTAAG CAGCCTGGTA TGACCGTACA GTTGGACTTC 
ACTTTAGAGA AAGGAGGCAA TTAA 

 

Protein sequence

MLRALVSIII GAAVTLGLFW FMAFLVGGGA QRAETSAETP VIEITMDRQD SKAQSKQRVV 
PQPPPPPAQP EKPQAAPPET SSNIDTAMSF NMGGVEAGGH SAGGFKLGNM MSRDGDATPI 
VRIEPQYPIA AARDGKEGWV QLRFTINELG GVEDVEVIQA EPKRLFDKEA IRALNKWKYK 
PKIVDGKPLK QPGMTVQLDF TLEKGGN