Gene SO_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1827 
SymbolexbD2 
ID1169599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1920177 
End bp1920581 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content43% 
IMG OID637343713 
ProductTonB system transport protein ExbD2 
Protein accessionNP_717435 
Protein GI24373392 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTA AAAAGCATTC CAGTGTAGAT GAGGAAGCGC AAATTGACAT GACACCGATG 
CTCGACATCG TGTTCATTAT GTTGATCTTC TTCATTGTGA CAACGTCATT TGTAAAGCCA
TCTGGTTTGG ATTACAACAA ACCTAAGGCC TCACAAGCGA CTTCGAAACC ATCTTCTAAC
ATTTTTATTG GTGTCAGTAA GAATGGGATC ATTATGATGG AAAACCGTCA GGTTGATATC
GAACGCGTCA CAGCTAACGT TGAGCGTATG CTCGCCGAAG CACCAGAGGC GGCAGTAATG
ATCCAAGCAG ATAAAGATAC CACTCATGGC TTAGTGGTTA AAGTATTAGA CCAAGTCAAA
GCGGCCGGTA TAGATAAGAT TTCGGTATCT GCGGGGAACG ATTAA
 
Protein sequence
MARKKHSSVD EEAQIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPKA SQATSKPSSN 
IFIGVSKNGI IMMENRQVDI ERVTANVERM LAEAPEAAVM IQADKDTTHG LVVKVLDQVK
AAGIDKISVS AGND