Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1827 |
Symbol | exbD2 |
ID | 1169599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1920177 |
End bp | 1920581 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637343713 |
Product | TonB system transport protein ExbD2 |
Protein accession | NP_717435 |
Protein GI | 24373392 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTA AAAAGCATTC CAGTGTAGAT GAGGAAGCGC AAATTGACAT GACACCGATG CTCGACATCG TGTTCATTAT GTTGATCTTC TTCATTGTGA CAACGTCATT TGTAAAGCCA TCTGGTTTGG ATTACAACAA ACCTAAGGCC TCACAAGCGA CTTCGAAACC ATCTTCTAAC ATTTTTATTG GTGTCAGTAA GAATGGGATC ATTATGATGG AAAACCGTCA GGTTGATATC GAACGCGTCA CAGCTAACGT TGAGCGTATG CTCGCCGAAG CACCAGAGGC GGCAGTAATG ATCCAAGCAG ATAAAGATAC CACTCATGGC TTAGTGGTTA AAGTATTAGA CCAAGTCAAA GCGGCCGGTA TAGATAAGAT TTCGGTATCT GCGGGGAACG ATTAA
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Protein sequence | MARKKHSSVD EEAQIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPKA SQATSKPSSN IFIGVSKNGI IMMENRQVDI ERVTANVERM LAEAPEAAVM IQADKDTTHG LVVKVLDQVK AAGIDKISVS AGND
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