Gene SO_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1825 
Symbol 
ID1169597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1918281 
End bp1919636 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content42% 
IMG OID637343711 
ProductMotA/TolQ/ExbB proton channel family protein 
Protein accessionNP_717433 
Protein GI24373390 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT TAATTACTAC AGCTGTATTA GCTGCAAGTT TTTCTTTAAC TGCTGGTATG 
GTTAGCGCTG CTGATGCGCC TAAGACCATC GACCAATTAT TGCAGCAAGT TAAAGTTGAT
CGCGCTGCTG AAGGTAAAGT TAATAGCAAA CGTGAACAAG AGTTCCAAGC TGAGCGTGGT
GATAAAGCTG CTCTGTTAAA GCGTGAAAAA GATGCGTTAG CGGCGGAAAA ACAACGCGGT
AAAGACCTGA ACCAAGCTTT CTTAGATAAC GAGCGTAAAA TCGCTCAGTT AGAAGAAGAT
CTAAAAACCG CTCAAGGTGA CTTGGGTGAA ATGTTTGGTG TCGTTAAAGG TGAAGCGGGC
GATTTCGCTG GTAAATTAGC GAGTTCAAAC GTAAGTGCTC AATACCCAAA TCGTGACAAA
TTTATTGCTG ATTTAGGTGC GCGTAAGCAA TTACCGAAAA TTGAAGAACT AGAAAAGTTT
TGGCAGGAGC AGCTGTTTGA AATGGCTGAA TCTGGCAAAG TGGTTAAATT TCAAGGTTCT
GTGACTGCGA TTGACGGTTC GGTTAAGACC ACTACTATCC ACCGTGTGGG AGCTTACAAC
TTAACTGCAG AAGGTAAATA TGTTGTATTT AATCCAGAGT TAAATCTAGT ACAAGAACTG
TCGATTCAAC CTGAAGGTTA TCAAGTTAGC TCAGTCAAGA AGTGGGAGCA AATCACTTCT
GGTACAGCTC CATTCTATAT CGACCCTGCT CGTGGTGTAT TGCTGAACAT TTACACTAAC
AAAGCCAGCT TTGAAGATCG TTTAGAATCA GGCGGTACGA TTGGTTATAT CATCTTAGTA
TTGTTGGCAC TTGGCTTATT AATTGCTGCT GAGCGTTTCA TTGTGCTGGC GGTTATTGGC
GCAAAAGTGA AAAATCAAGC GAAGAACGTT GATAAACCAG GTAATAACGC ACTTGGTCGT
ATCTTGAAGG TTTACCATGA AAACAAAGAT GTTGATGTTG AAACATTGGA GTTGAAATTG
GATGAAGCCA TTCTAAAAGA AACACCAGCA TTAGAAGCGC GTATTCCAAT TCTAAAAGTG
ATTGCTGCTA TCGGTCCTAT GTTAGGTCTG TTAGGTACAG TAACAGGTAT GATTGCAACC
TTCCAAAGTA TCCAATTGTT CGGTACTGGC GATCCAAAAC TGATGGCTGG CGGTATCTCT
ATGGCATTGG TTACAACAGT TCAAGGTTTG GTTGCGGCAC TGCCTCTGAT GTTATTGCAT
GCAATGTTAG TTGCGCGTAG TAAATCAATT ACCCAGATTC TGGAAGAGCA AAGTGCTGGC
ATCATCGCAG CGCATGCTGA GAAGAGGGCT GACTAA
 
Protein sequence
MKKLITTAVL AASFSLTAGM VSAADAPKTI DQLLQQVKVD RAAEGKVNSK REQEFQAERG 
DKAALLKREK DALAAEKQRG KDLNQAFLDN ERKIAQLEED LKTAQGDLGE MFGVVKGEAG
DFAGKLASSN VSAQYPNRDK FIADLGARKQ LPKIEELEKF WQEQLFEMAE SGKVVKFQGS
VTAIDGSVKT TTIHRVGAYN LTAEGKYVVF NPELNLVQEL SIQPEGYQVS SVKKWEQITS
GTAPFYIDPA RGVLLNIYTN KASFEDRLES GGTIGYIILV LLALGLLIAA ERFIVLAVIG
AKVKNQAKNV DKPGNNALGR ILKVYHENKD VDVETLELKL DEAILKETPA LEARIPILKV
IAAIGPMLGL LGTVTGMIAT FQSIQLFGTG DPKLMAGGIS MALVTTVQGL VAALPLMLLH
AMLVARSKSI TQILEEQSAG IIAAHAEKRA D