| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1822 |
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| Symbol | |
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| ID | 1169595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1914178 |
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| End bp | 1916988 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637343709 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_717430 |
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| Protein GI | 24373387 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAGA ATAACTTATT AGCCAAATCT GTGCGTTTCG CATTGATTGG TGGTGTAGCT
GCAACTGCAT TAAATGTGCC ATTAGTCATG GCTGCTGATG AAGCTGGTGC TGATAAAAAA
GTAGAGCGTA TTGAAGTAAC GGGTTCACGT ATCAAGCGTA CCGATATGGA AGCGGCAAGT
CCTGTTCTTT CGATGAATAG AGATGAGATT GAAGCCACAG GTATGATTAG TGTTGGTGAT
ATCTTACAAA CAATTCCAGC TGCAGGTTCT GCACTAAACA CTGCTTTCAA CAATGGTGGT
GACGGTTCTA CTAACATGGA CCTGCGTAAC CTTGGGTCTC AACGTCTACT GGTGTTAGTG
AATGGTAAGC GCTGGATATC TTCTTTAGGT TCAACGGTTG ACTTAAACAC AATTCCTACA
TCAACAATTG AGCGCATCGA TGTATTAAAA GATGGTGCTT CAGCGGTTTA CGGTTCTGAC
GCTATTGCGG GTGTTGTTAA CATTATTACT CGCAAAAACT TTGAAGGTGT TGAAGTTTCT
GTCTATGGCG GACAAAACGC TAAATATGAC GATGGTCGCC AATACACCGC TGATTTTACT
GTTGGTTCAG TATCTGAAAA AGGTGGCTTA TTATTCAACA TGGCCCACGT GACTCAGCAA
CCTATTTGGG CTGGTGACCG TGATATTTCT GATACTGGTT ACAGTTCTAC TGCGGATAAC
ACTCGTATCC GCGTTAAGGG CTCGCAACTG AATCAAGCTA ACCAAGATGC ATTAGCTGCT
ATTGGTAAAC CAAACAGTTC TGGTATTTAC GACTATATGT CTAAAGAAGG AACTGGCGCC
AATGTTGGCA TGGATCAATT CCGTCCGCGT ACCGGTAGCG ATGTTTATAA CTTTGCCCCT
GATAACTATC TATCTACACC GCAAAACCGT AACTCTTTCT ATGTTCAGGG TTTTTATGAT
ATTTCGGACA ACTTAAGAGT TGTTTCTGAC TTTATGATGA CCAACCGTAA GTCATCTCAA
GAATTAGCGC CTATGCCTCT GACATTAGGC GCCTCATTTG GCGCTGCTGC AAGTCGTGTG
GATATTGGTG GAAATAATAT CTATAACCCA TTTGGTGAAA CACTCTATGG TGATAGTGCA
CGCGCGGTTG CTAATGGTAA ACCTGTTGGG TATGTGCCTT ATGCTTTACA GCGCCGTATG
GTTGAGGCCG GTTCTCGTCA ATACAATCAG AACGATACCA CCTATCGTGC AATGGTTGGT
CTTGAAGGCA ATATCAATGA TAACTGGAGT TGGACTGCGA GCTACATCTA CGGCCAAAAT
AACCAAGACG TGTTGACCAC AGGTCTACTC AATTTAACGC GTATCAATCA AGCATTAGGT
GATAACTGTA ATGCAAGCAA TGGTTGTGTG GCCTTAAACC TGTTTGGCGG TCCGGGTTCC
GTAACTCAAG ATATGGTTGA TTATATTACT TTCGATAGCG TTAGCCGTTC AGGTTTAACG
ATGAAAGATT ATACATTTAA CATCGCGGGT GACCTATTTG ACTTACCTGC GGGTCCTGTT
GGTTTAGCTT TCGGACTTGA ACGTCGTGAA GAATCTGGTT TTGATACGCC AGATCCATTA
ACTGTAACAG GTGAGTCTTC TGGTAACCAA CGCGATGCGA CTTCTGGTGG CTTCCGTTTG
GATGAAGCTT ATGCTGAATT AGCGATTCCT GTAATAGAAA GCTTATTAAT TACGCCGGCT
GTTCGAGTTT CTGACCACGA TGCCTATGGT AACAATACTA CGGGTAAAGT GGGCGCTGAA
TTCCGCCCAA TGGATGATAT GTTGTTACGT GGTACATGGG CTCAGGGTTA CCGTGCTCCA
TCTATTTCTG ATTTATATGC GGGTAGCGCA GATTCTTACC CAACTTGGAA TGATCCTTGT
AATACAAGAG ATTCTAAAGG TAATGTACTT AATATTTCAG GTTTACCAGG ATGTGCTGGT
GTGCCTGATG GCTATCGTCA AGCCAACACG CAAATTCGGA TTTCTCAGGT TTCATCACCC
GATTTAAAAC CTGAAACTTC AGAGTCATAC ACTTTTGGTA CAGTGTATAA CCCATCTTGG
TTAGAGGGGG CAGAATTTAC CGTTGATTAT TATAACATCA AGGTTGAAGA TGCAATTGGC
CGTTATGGAC ATACCACTAT TGCTCGTGAG TGTGCTACTG GAGATAAGGT TTCCTCTTGC
GATAAGATTG ACCGTGATAG TTTAGGTAAT ATTGTTGATT TACGTAACTT CCTCCAAAAT
GCTGGCACAT ATGAAGTTGA AGGTATCGAC TTCTTCACAG CATATCGATT CCCTGAAACA
TCATTTGGTT CATTCAAAAC TTCACTTGAT CTGGCTTATG TTCTTGGTAA TGAGTTTGAC
GGAGAAGATC GTGCAGGTAT TCAGTATGGT GATGGTGGTT TCCCTGAACT CAAAGGTAGT
TTAAACATTG ATTGGGCAAT GGGTGATTGG GATGCACATT GGAAAATGCG TTATGTTGGT
GAGTTGACCA GTGATTTTTA TGCTAATGAT CCAGCCAATT ATGACTTCTA TAAAGACAAT
GGTTATAGAG AGACATTCAG TGCTTATATG GTTCATAACG TATCTGTTGG TTATAACATT
GAAGACTATA ACACTAAGGT TTCTTTAGGT ATCAATAACT TGTTCGCAAC AGAGCCGCAG
GCTGAAGGCC CAACTAATAA CGAAGCGCTT TCTAGCAACA ACTTCTCTGT TACAGAGTAT
GATGTGAATA TGGATCGCTT TATCTATTTA CGTGCAACAA CCAAGTTCTA A
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| Protein sequence | MHKNNLLAKS VRFALIGGVA ATALNVPLVM AADEAGADKK VERIEVTGSR IKRTDMEAAS
PVLSMNRDEI EATGMISVGD ILQTIPAAGS ALNTAFNNGG DGSTNMDLRN LGSQRLLVLV
NGKRWISSLG STVDLNTIPT STIERIDVLK DGASAVYGSD AIAGVVNIIT RKNFEGVEVS
VYGGQNAKYD DGRQYTADFT VGSVSEKGGL LFNMAHVTQQ PIWAGDRDIS DTGYSSTADN
TRIRVKGSQL NQANQDALAA IGKPNSSGIY DYMSKEGTGA NVGMDQFRPR TGSDVYNFAP
DNYLSTPQNR NSFYVQGFYD ISDNLRVVSD FMMTNRKSSQ ELAPMPLTLG ASFGAAASRV
DIGGNNIYNP FGETLYGDSA RAVANGKPVG YVPYALQRRM VEAGSRQYNQ NDTTYRAMVG
LEGNINDNWS WTASYIYGQN NQDVLTTGLL NLTRINQALG DNCNASNGCV ALNLFGGPGS
VTQDMVDYIT FDSVSRSGLT MKDYTFNIAG DLFDLPAGPV GLAFGLERRE ESGFDTPDPL
TVTGESSGNQ RDATSGGFRL DEAYAELAIP VIESLLITPA VRVSDHDAYG NNTTGKVGAE
FRPMDDMLLR GTWAQGYRAP SISDLYAGSA DSYPTWNDPC NTRDSKGNVL NISGLPGCAG
VPDGYRQANT QIRISQVSSP DLKPETSESY TFGTVYNPSW LEGAEFTVDY YNIKVEDAIG
RYGHTTIARE CATGDKVSSC DKIDRDSLGN IVDLRNFLQN AGTYEVEGID FFTAYRFPET
SFGSFKTSLD LAYVLGNEFD GEDRAGIQYG DGGFPELKGS LNIDWAMGDW DAHWKMRYVG
ELTSDFYAND PANYDFYKDN GYRETFSAYM VHNVSVGYNI EDYNTKVSLG INNLFATEPQ
AEGPTNNEAL SSNNFSVTEY DVNMDRFIYL RATTKF
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