Gene SO_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1813 
Symbol 
ID1169586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1903607 
End bp1903972 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content44% 
IMG OID637343700 
ProductDNA-binding protein, putative 
Protein accessionNP_717421 
Protein GI24373378 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA AATCTAGCTT ACCTGCAGTT GTATGTGCTG TTGTATTTTC CGCACTGTTA 
ACCATACCTG CGATTGCGGC AGATCCGGTA AAAGAAGCCT CTAAGGTGCA AAGCCAAGCG 
AAAACTGAGG CCAAAAACAT GGCAAACGAT GCTAAACAAG CATTGCCAGA TGCGGCGCAA 
GTCAATATCA ACACCGCTTC GGCTGAACAA TTACAACTGT TAAAGGGTAT TGGTGTCGCA 
AAGGCGCAGG CCATCATCGA TTATCGTACC CAAAATGGAC AATTTAAGGC CATTGATGAG 
TTAGCCAATG TCTCAGGTAT TGGCGCTAAG CTGATTGAGC AAAATCGTCA TATGATTAAG 
TTGTAA
 
Protein sequence
MKVKSSLPAV VCAVVFSALL TIPAIAADPV KEASKVQSQA KTEAKNMAND AKQALPDAAQ 
VNINTASAEQ LQLLKGIGVA KAQAIIDYRT QNGQFKAIDE LANVSGIGAK LIEQNRHMIK 
L