Gene SO_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1809 
SymbolpspC 
ID1169582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1898755 
End bp1899141 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content44% 
IMG OID637343696 
Productphage shock protein C 
Protein accessionNP_717417 
Protein GI24373374 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1983] Putative stress-responsive transcriptional regulator 
TIGRFAM ID[TIGR02976] phage shock protein B
[TIGR02978] phage shock protein C 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGAA CTAGCGGCCG TACTTTGTAC CGTATTCCCC AGTCAGGTAA AATCGCCGGT 
GTGTGTGCAG GGATAGCTGA ATACTTTGCG ATTGAAACTT GGTTAGTACG TGTACTTGCT 
GTTTCTATCT TCCTATTGGG TGGTTCGGGT GTCGTCTTTA TTATCTATGT GGCGTTATGG 
GTAATACTCG ACATCAAACC TCAAAATAGC TCTGTTAGGG ATGACATTGA AGTGAAGAAG 
AAACCTTGGC AGTCGGGAGA GCCTGCTAAA CAGGCGCTGA GCGATGTGAA TCGTCAGTTT 
AGGAGCCTTG AGGTGAGATT GCAAAACCTT GAGCGCCATG TCACTTCTGA CAATTTTGAT 
TTAAAAAGAC AAATCAATAG TTTGTAA
 
Protein sequence
MRGTSGRTLY RIPQSGKIAG VCAGIAEYFA IETWLVRVLA VSIFLLGGSG VVFIIYVALW 
VILDIKPQNS SVRDDIEVKK KPWQSGEPAK QALSDVNRQF RSLEVRLQNL ERHVTSDNFD 
LKRQINSL