| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1805 |
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| Symbol | sapA |
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| ID | 1169578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1894864 |
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| End bp | 1896441 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343692 |
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| Product | peptide ABC transporter, periplasmic peptide-binding protein |
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| Protein accession | NP_717413 |
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| Protein GI | 24373370 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGGT TGTTGGTTGC ATGTGGCCCC CAACGACTCC CTTCTGGTTT GGTTTATTGT
TCCGAAGGGA ATCCCGAGTC TTTTAATCCG CAGTTAGTGA CCTCCGGCAC CACTATCGAC
GCTACATCAC ACCAAATTTA TAGCCGCTTA GTGGACTATG ATGCTATCTC TGGTCAACTC
GTGCCCGCGC TGGCGACTAG CTGGGCTGAA AGTGATGATG GTCTTAGCTA TCGTTTTACA
CTCAGGGAGA ATGTTAAGTT TCAGCATTCA TCCCGTTTTA CACCGAGTCG CTATTTTAAC
GCCGATGATG TGCTGTTTTC CTTCAATCGG ATTATCGACA CGCATCACCC TTACCATGAT
GTTTCGCGCA CCGGTTACCC TTTTTTCCAA AGTATTGGTT TTTCAGAGCA AGTTAACAGT
GTCGAAAAAA TCAATGACCA TGAAGTGGTG TTTCGTTTAG CTCGAAAAGA TGCGTCATTT
TTATCGAATT TAGCGACTGA CTTTGCAGTC ATTCTCTCCA GTGAATATGC CGAGCAACAA
CTTGCGCTGG GTCACCCTGA AAATGTTGAC CATTTTGCCA TCGGTACAGG GCCTTTTACC
TTAGTACATT ACGCTAAAAA CGAATATATT CGCTATCGCC GCAATCCTGA CTTTTGGGGA
GAGCCAGCGA ACGTCGAGAT GCTGGTCTAT GATATCACTC CCAAAAGTAC AGTGAGACTG
GCCAAACTGA TCGCGGGTGA TTGCAGTGTT TCAGCCCTGC CCAAAGCGGG AGAACTGCCA
GTTATCAAAC AACATGAGCA GCTCAAAATC GAATCACAAC CTGGGCTTAA CGTGGCGTTC
TGGGCCTTTA ATACTCAAAA ACCACCATTA GATGATGTTC GAGTGCGCCG CGCCCTTGCC
CATGCAGTGG ATAAACAAAA TATCTTACGT GCTGTTTATC AAAATACAGC GATAGAAGCG
ATTGGCGTAC TCCCGCCAGC CTCATGGGCC TACGACAGCA ATAAAAAACT GTTAGATTAC
AATCCTCAAA AAGCCAGAGA TCTGCTAACA GAAGCTGGCA TCAATAATCT GAGCATCGAT
ATTTGGGCAA TGCCTGTTGC GAGGGCTTAT AATCCTAACA CACTGAAAAC GGCTGAGTTA
ATTCAATCGG ATTTGGCCAA TATCGGCGTA AAAGTCAATA TCATCAGTTA CGACTGGAGT
GTCTTTACCC AGAGATTAAG CCGCGATGAA TATGACTCAG TACTGATAGG CTGGAATGCC
GATAATAGCG ATCCCGATAA CTTCTTCACC CCACTGCTGA GTTGCTCATC GATGCAATCT
AACAATAATC GCTCTCGCTG GTGTAATAAA GAGTTTGATG CGATTTTAGA TAGAGCAAGG
GAAGTCCCTA CTCAAGCCGA GCGTAAACAA ATTTATCAAC AAGCCGAAGC TTTTTTAGCT
GACCAAGTGC CCATGCTGAA TTTAGCCCAT GCAAAGCGGG TCGCTTTAAC CCGTAATAAT
GTACATGATA TGCAACTTAC ACCTTTTGGC GGCATTTCCT TTGTAAAAAC TAACCAAACC
ACGCAGGAGA CTAACTGA
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| Protein sequence | MSGLLVACGP QRLPSGLVYC SEGNPESFNP QLVTSGTTID ATSHQIYSRL VDYDAISGQL
VPALATSWAE SDDGLSYRFT LRENVKFQHS SRFTPSRYFN ADDVLFSFNR IIDTHHPYHD
VSRTGYPFFQ SIGFSEQVNS VEKINDHEVV FRLARKDASF LSNLATDFAV ILSSEYAEQQ
LALGHPENVD HFAIGTGPFT LVHYAKNEYI RYRRNPDFWG EPANVEMLVY DITPKSTVRL
AKLIAGDCSV SALPKAGELP VIKQHEQLKI ESQPGLNVAF WAFNTQKPPL DDVRVRRALA
HAVDKQNILR AVYQNTAIEA IGVLPPASWA YDSNKKLLDY NPQKARDLLT EAGINNLSID
IWAMPVARAY NPNTLKTAEL IQSDLANIGV KVNIISYDWS VFTQRLSRDE YDSVLIGWNA
DNSDPDNFFT PLLSCSSMQS NNNRSRWCNK EFDAILDRAR EVPTQAERKQ IYQQAEAFLA
DQVPMLNLAH AKRVALTRNN VHDMQLTPFG GISFVKTNQT TQETN
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