| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1803 |
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| Symbol | sapC |
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| ID | 1169576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1892956 |
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| End bp | 1893846 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343690 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_717411 |
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| Protein GI | 24373368 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCCAG TTAAAATTTA TCAGGAAGAT CAAATTGCCT CCCCTATGAT GCGGGTCTGG
CAAAATTTTT CGGCAAACCC TTTTGCCTTA GCTGGGCTGT GGACCATTGC TTTTTTGCTG
CTGCTCACCC TCTTTGGTCC TCTCATTGCT CCCTTCGCAC CTGAGGCTCA AGATCCACGC
GCCCTATTAT TACCACCTTC TTGGGATCCC TCGGGAACTG TATCGCACTT TTTAGGCACA
GATGATCTTG GCCGCGATAT TTTTAGCCGC CTGCTACATG GTGCGCATTT GACTTTTGGT
ATGGCATTAA TGATTGTCGG TACAGCACTG TTTACCGGAT TTATCATCGG GTCACTTTCA
GGAATGATGC GTGGATTAAA GTCCAGTATT TTGGGTCATT TACTCGATGC GCTGCTCTCC
ATCCCTTCAC TACTAATGGC AATTTTAGTG GTTGCCGTCA TGGGTCCAGG ACTTGAAAAC
GTGTTTTGGG CGGTAGGAAT TGCCTTAACG CCACAATTTG TGCGCTCAAT TCATCAATCG
GTTCATGAAG AATTACAGAA AGAGTATGTT ACTGCGGCCC GTTTGGATGG TGCCAATTCG
ATACAAATTT TTTGGTATGT GATTATGCCG AACGTCTGGG AGGTGGTGAT TATTCAAACC
ACTTTAGCTA TCTCTGCTGC GATTTTAGAT ATTGCCGCAC TCGGCTTTTT AAGCCTTGGT
GCTCAAGCCC CAAGCCCAGA ATGGGGCGCT ATGGTAGCGC AAGGCATGGA TAATTTACTC
ACCGCACCTT GGACTGTGAC GATTCCAGGG CTTGCGATTC TCTTTAGTGT GCTTGCCATT
AACTTGGTTG GCGATGGCTT AAGATCGGCG CTTGCGCCCA TCAGAAACTA A
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| Protein sequence | MPPVKIYQED QIASPMMRVW QNFSANPFAL AGLWTIAFLL LLTLFGPLIA PFAPEAQDPR
ALLLPPSWDP SGTVSHFLGT DDLGRDIFSR LLHGAHLTFG MALMIVGTAL FTGFIIGSLS
GMMRGLKSSI LGHLLDALLS IPSLLMAILV VAVMGPGLEN VFWAVGIALT PQFVRSIHQS
VHEELQKEYV TAARLDGANS IQIFWYVIMP NVWEVVIIQT TLAISAAILD IAALGFLSLG
AQAPSPEWGA MVAQGMDNLL TAPWTVTIPG LAILFSVLAI NLVGDGLRSA LAPIRN
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