| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1801 |
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| Symbol | sapF |
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| ID | 1169574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1891179 |
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| End bp | 1891964 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343688 |
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| Product | peptide ABC transporter, ATP-binding protein |
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| Protein accession | NP_717409 |
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| Protein GI | 24373366 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACCC CACTGCTTAA AGTTAACGAT CTCTTTAAAA GATACGACAC TGGTTATAAG
GGTTTTACTC GCCAATATAA CGATGCCCTC GCCCCAGTCT CCTTCGAGCT GAATCGCGGT
GAGACCTTGG CCATCGTGGG TGAAGCGGGT TCAGGCAAAA GTACCTTAGC ACGCATTTTA
GTGGGCGCAG AACCTCGCAG CGGTGGTGAA ATTTATTTCG AAGGCGAAGC TTTAGATAGC
CGCAATATCA AACAACGCTG CCGCCTCATT CGGATGATTT TCCAAGACCC TAATACGTCG
CTCAACCCAA GACTGACTAT TGGCCAATTG CTCGATGAAC CTTTACGCTT TAATACTCAG
CTATCCGCGA AAGAGCGTAA CACTCAAGTA ATTGACACAC TTAGAAAAGT TGGTTTATTA
CCCGAGCATT CTGACTTTTA TCCGCATATG ATTTCTGAAG GTCAAAAACA ACGGGTCGCC
GTAGCGCGAG CACTCATGCT CAACCCGAAA ATCATTATCG CCGATGAAGC CCTGACCGCT
TTGGATCTCT CTGTTCGCTC GCAAATCCTC AATTTGTTGC TGAAATTGCA AAAAGACTTA
GGTTTGTCAT ACATTTTCGT GTCCCATAAC CTCAATATTA TTCGCCATGT TAGCGATAAA
ATTATGGTAT TACACAAAGG GGTAATGGTT GAAAAAGCCC CTACAGAACA GATATTTAAT
TCACCTCAGC ACGAATATAC TCAAAGGCTT GTTCAGGAGC AGAGCCTGTT TGTTCACAAA
CGTTAA
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| Protein sequence | MTTPLLKVND LFKRYDTGYK GFTRQYNDAL APVSFELNRG ETLAIVGEAG SGKSTLARIL
VGAEPRSGGE IYFEGEALDS RNIKQRCRLI RMIFQDPNTS LNPRLTIGQL LDEPLRFNTQ
LSAKERNTQV IDTLRKVGLL PEHSDFYPHM ISEGQKQRVA VARALMLNPK IIIADEALTA
LDLSVRSQIL NLLLKLQKDL GLSYIFVSHN LNIIRHVSDK IMVLHKGVMV EKAPTEQIFN
SPQHEYTQRL VQEQSLFVHK R
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