| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1790 |
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| Symbol | ppiB-1 |
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| ID | 1169563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1876618 |
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| End bp | 1877112 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637343675 |
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| Product | peptidyl-prolyl cis-trans isomerase B |
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| Protein accession | NP_717399 |
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| Protein GI | 24373356 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCACAT TACACACTAA TTTTGGCGAC ATTAAACTGC AACTAAATGC CGAAAAAGCA
CCGCTGACCG TGGCAAACTT TATGAAATAT GTCGACGAAG GTTTCTTCGA TGGCACCATT
TTCCACCGTG TAATTGACGG CTTTATGATC CAAGGTGGTG GCTTTACGGC TGAAATGAGC
CAAAAACGTT GCCATGAGCC AGTGAAAAAT GAAGCGAACA ATGGTTTATC AAACCGTACT
GGTACTATCG CTATGGCGCG TACTTCTGAT CCGCATTCAG CGACAGCTCA ATTCTTTATC
AACGTAAACG ACAATACCTT CCTCGATTTT AAATCTGAGA GCATGCAAGG TTGGGGTTAC
TGCGTATTCG GTGAAGTAGT TGAAGGCATG GACATTATTG AAAAAATCAA AGCGGTAAGC
ACAGGTAACC GTGGCATGCA TCAAGATGTA CCATTAGAAG CGGTCGTGAT TGAAAAAGTC
AGTGTAGCGG CCTAA
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| Protein sequence | MITLHTNFGD IKLQLNAEKA PLTVANFMKY VDEGFFDGTI FHRVIDGFMI QGGGFTAEMS
QKRCHEPVKN EANNGLSNRT GTIAMARTSD PHSATAQFFI NVNDNTFLDF KSESMQGWGY
CVFGEVVEGM DIIEKIKAVS TGNRGMHQDV PLEAVVIEKV SVAA
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