| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1788 |
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| Symbol | miaE |
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| ID | 1169561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1875042 |
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| End bp | 1875827 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637343673 |
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| Product | tRNA-(MS[2]IO[6]A)-hydroxylase |
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| Protein accession | NP_717397 |
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| Protein GI | 24373354 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAT TATTGGCACC TGTTCATGCG TTTCTTCGCT GTGAGACGCC GCAAACTTGG
ATTGATGTAG CAAGAGCCTC AGCTTCGTTA GATGAACTCT TAATCGATCA TTGTAATTGT
GAGCTAAAAG CCGCGCAGAC TGCGATGTTT TTGTTAAGGC GTTATGCCCT TAATGCTGAA
AGTGGGCAAT CGCTGTTGGC GTGGGCAAAA CCCTACGAAG AATTTGTCTA TCATAAGGAT
CGCGATATTG AGCAGTTTTT GGCCCGTGAT GTCAAAAAGA ATGAGCTGGT TGCCGTTCTA
CAACCTAATC AACATTTTTC CTTTGCTCAG GATCTTATTC CGCCACTTAT TCGTCTAATA
AAAGAAGAGT TCCATCATTT TGAACAAGTG CTTGAGTTGA TGCACGCACG GCAAATTCCC
TATCGCAATA TTCGCGCAGG GCGTTATGCC AAGGGTATGA TGAGCCATGT GACGACCCAT
GAGAAGAATA TTCTGCGCGA TAAGCTAATT GTCGGTGCTT ATATTGAGGC GCGCTCCTGT
GAGCGCTTTG CCAAATTAGC GCCTTATTTA GATGCAGAAT TAAGTAAGTT TTATGTGTCT
TTGCTGCGCT CTGAGGCTCG TCATTTTGAG GATTATCTTA AGCTTGCACA ATTGGTCTCA
AGTGAGGATA TCAGCGAGCG CGTTGCTTAT TTTGGCGAAA GGGAAGCCGA ATTGATTATG
GCGCCCGATG ACGAATTTCA TTTCCACAGT GGCCAGCCGC AGGCTATCAA ATACTCATAT
GCATGA
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| Protein sequence | MQQLLAPVHA FLRCETPQTW IDVARASASL DELLIDHCNC ELKAAQTAMF LLRRYALNAE
SGQSLLAWAK PYEEFVYHKD RDIEQFLARD VKKNELVAVL QPNQHFSFAQ DLIPPLIRLI
KEEFHHFEQV LELMHARQIP YRNIRAGRYA KGMMSHVTTH EKNILRDKLI VGAYIEARSC
ERFAKLAPYL DAELSKFYVS LLRSEARHFE DYLKLAQLVS SEDISERVAY FGEREAELIM
APDDEFHFHS GQPQAIKYSY A
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