| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1782 |
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| Symbol | mtrD |
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| ID | 1169556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1868251 |
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| End bp | 1869171 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343668 |
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| Product | decaheme cytochrome c MtrD |
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| Protein accession | NP_717391 |
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| Protein GI | 24373348 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTACAT TAATGTTATC GATTCTCAGC CTTTCAACCT TAGCAACGCC TTGGGATGAT
AAGAGCTCTG AGGAAGTCGT AGCAACGTTA GATAAGAAGT TTGCCGAAGG TAAATACTCG
GCCAAAGGCG CTGACACTTG CTTGATGTGC CATAAGAAAA GTGCAGTTGT CATGGCTATA
TTCGATGGCG TTCATGGCAA TCCCAACATC AAAGATTCCC CCATGGCTGA CTTACAATGT
GAGGCCTGCC ACGGCCCGCT GGGTAATCAT AACAAAGGTG GGAAAGAGCC GATGATCACC
TTTGGCCAGA ACTCCCCTGT CCCCGCACAA AAGCAAAATA GTGTCTGCAT GAGCTGCCAT
AACGACGATC AACGTATCGC TTGGAAAGGC AACCACCATG ATAATGCCGA TATTCCTTGC
AGTAGCTGTC ACCAAGTGCA TGTCGCAAAA GATCCCATCA GCGACAAAGC CAACGAAGTC
GCGATTTGTA CCCAATGCCA TAGTCAACAA AAAGCCGATA TGCACAAACG CTCATCGCAC
CCTTTGCAAT GGCAACAAAT GGTCTGTAGT GATTGCCACA ATCCCCATGG CAGTTTGAAT
GATGCGAGTT TGAAACAAAT GACCGTCAAT GAAAACTGCT ACAGCTGCCA TGCCGAAAAA
CGTGGCCCTA AACTCTGGGA ACATGCCCCT GTTACGGATA ATTGTGCCAA CTGTCATAAC
CCCCACGGCA GTGTGAATGA GTCAATGTTA ATCAGCAAAC CACCTCAATT ATGCCAGCAG
TGCCATGCCT CCGATGGCCA TAGTAGTAAT GCCTACTTTG GTAATCAAAC CAACGCCTTC
ACCTCGGGTA ATTCCTGTAT GAATTGTCAT GGTCAAGTGC ATGGTTCAAA TCACCCATCC
GGCAAGTTGC TGCAGAGATA A
|
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| Protein sequence | MLTLMLSILS LSTLATPWDD KSSEEVVATL DKKFAEGKYS AKGADTCLMC HKKSAVVMAI
FDGVHGNPNI KDSPMADLQC EACHGPLGNH NKGGKEPMIT FGQNSPVPAQ KQNSVCMSCH
NDDQRIAWKG NHHDNADIPC SSCHQVHVAK DPISDKANEV AICTQCHSQQ KADMHKRSSH
PLQWQQMVCS DCHNPHGSLN DASLKQMTVN ENCYSCHAEK RGPKLWEHAP VTDNCANCHN
PHGSVNESML ISKPPQLCQQ CHASDGHSSN AYFGNQTNAF TSGNSCMNCH GQVHGSNHPS
GKLLQR
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