| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1774 |
|---|
| Symbol | |
|---|
| ID | 1169548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 1853738 |
|---|
| End bp | 1854961 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637343660 |
|---|
| Product | putative sugar diacid utilization regulator |
|---|
| Protein accession | NP_717383 |
|---|
| Protein GI | 24373340 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3835] Sugar diacid utilization regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCTGC TCGATTCAAC CATCGCCAAA AAAATTGTCA GTCGCACGAT GAAAATTATC
GGGCACAATA TTAATGTAAT GAATGGTCAG GGCGTCATCT TAGGTTCGGG CGATCCAAAA
CGTATCGGCT CAACCCATGA GGGCGCTTTG CTCGCGATTG CCCAAAATCG CAATGTGGAA
TTGAGTGACG AAGTCGCCTC TGGCTTACAT GGCGTTAAAC CTGGCATCAA CCTCCCCTTG
CATTACCAAG GGCAAATCAT CGGTGTAATT GGAATTACAG GTGCTCCTGA TGAGTTAGCC
CATTATGGCG AGCTACTGAA AATGACTGCA GAGATGATTG TCGAGCAAGC CAATCAGCAG
GACAAATTGC AGTGGGAAAA TCGCCAGCGG GAAGAATTTA TTCTGCAACT TATCAAGGCG
AACACCGATG ATGAGCAGTT GCAGCGCTGG GCAAAACAAC TCGATATTGA TATTAACCTT
CCACGAGTAG CTGCCATTAT CGAGATCAGT GAAAAGCTGT CTGCGCCCAT CCATAAAACC
GCATCGCTTA TCAATGCAGC AGCTAGCGAA TCAAGTGTTG ATGAGCGTAA TCCAAGGGTC
AGTGAAACCC TCAAACAAGT GCTGCATTTA CTGCAAAATC CCGACCGAGG CAACCTAATT
GCCATGACGT CGATGTCGCA ACTGGTGATC CTAAAACCCG CCTTTTTAGA TGGCAAACAA
TGGGACCCCG AGCTTGAAAA CCAACGTATC GATAAGTTAT TGCAACGTTT ACCAGCGCAA
ATGGGTTTAC ATTTTAAAAT AGCCCTCGGC CACTTCTTCC CCGAAAAAGG CGGCATTGCT
CGCTCTTATC AAACCGCCCA AGAGACTTTG AACTTAGGTA AACAGCTAAA CCCTGAAGGC
ACAAAATACC TGTTTGAGGA TTATTCCTTA CAAGTGTTGC TCTCTGGGCT TAAACATGAC
TGGCGTGGAC AAGCACTAGC AAGTCCCTAT CAACAACTGA CTCAAGCCGA CAAAAATGGT
CAGCTTCGCA AAACCTTAGC CGCTTATATC ACCCACTTTG GTGATGCGCA GCAATGTGCC
AACGCCCTGT TTATCCACCG AAATACCTTA AGATACCGTC TAGATAAAAT TCAACAATTA
ACCCAAACCG ATATTCAATC CTTGCATGGC TTATTGAGTT TGTATCTAGG GCAACTGCTT
GATACTTCAG CAAACCCAAG GTAA
|
|---|
| Protein sequence | MYLLDSTIAK KIVSRTMKII GHNINVMNGQ GVILGSGDPK RIGSTHEGAL LAIAQNRNVE
LSDEVASGLH GVKPGINLPL HYQGQIIGVI GITGAPDELA HYGELLKMTA EMIVEQANQQ
DKLQWENRQR EEFILQLIKA NTDDEQLQRW AKQLDIDINL PRVAAIIEIS EKLSAPIHKT
ASLINAAASE SSVDERNPRV SETLKQVLHL LQNPDRGNLI AMTSMSQLVI LKPAFLDGKQ
WDPELENQRI DKLLQRLPAQ MGLHFKIALG HFFPEKGGIA RSYQTAQETL NLGKQLNPEG
TKYLFEDYSL QVLLSGLKHD WRGQALASPY QQLTQADKNG QLRKTLAAYI THFGDAQQCA
NALFIHRNTL RYRLDKIQQL TQTDIQSLHG LLSLYLGQLL DTSANPR
|
|---|
| |