| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1771 |
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| Symbol | |
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| ID | 1169545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1850831 |
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| End bp | 1852189 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343658 |
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| Product | GntP family permease |
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| Protein accession | NP_717381 |
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| Protein GI | 24373338 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCTAT TCAAACTGAC TTTACTTGCC CAAGCCTGCA TCATAGGCTT AGCCTTCACT
TCACCGACAT TAATCGCCGC CGAAAAAACC ATTCCCGAGC TAGTTGATGC AGTCAATGGC
ACGCCGGATG CGGCGAGTCG CGAAGCGGGT AAAAAAGTGA AACTGCGTAA TCACACTAAG
GGATTTTGTA CCTCCGGCTA TTTTGCACCC AACCCAGAGT TACAAGATTC GCTAGCGATT
CCATTTTTTA ATCAAAGCCA AATTAAGGTT ACCGCTCGCT TTTCCCTAGG CGGCACGAAT
CCTCAAATCT CCGACAAAAC CCCAGGGCGC TTTATGTCAC TCAAAATTGA TGGCGATAAA
GAAAACCTGA ACTTTGTCAC CACCAATGTG CCGGTGTTCT TTGCTAGTAA TCTGGATGAT
TTTTTTACCT TTCAGACTAA AGTGAAGCAA GGCGCCGAAG GTAAACAATG GCTTATCGAC
AATAAGCCCG ATGCCAAAGC CTTTTTCGAC TATGTAAAAC AACTGCCACC CAGCCCCAGC
TTTGCCAATA GTCGCTACTT TGGCGTAAAC AGCTTTCTGT TTACCGACAA GCAAAATAAC
AGCGTTGCGG GTAAATGGAT TTTTGAACCC GTCGCGGGCA CCGCAGCGCC TTCAGCCAGC
GAACTTGCCA ATCTGGGTGA TGATTTTTTA AAGGCGGAAT GA
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| Protein sequence | MNLVLILIGV IAFIVIATSK FKLHPFLTLI LAAFIAAFAY GLPSGDIAKT ITTGFGNILG
YIGLVIVLGT IIGIILEKSG AAITMADVVI KVLGKRFPTL TMSIIGYIVS IPVFCDSGFV
ILNSLKQSMA NRMQVSSVSM SVALATGLYA THTFVPPTPG PIAAAGNLGL ESNLGLVIGV
GLFVAAVASF AGMLWANRFA GVEPDGEGAE ELKAQANDFE SLKQSYGTLP SPLKAFAPIF
VPILLICLGS VANFPSAPFG KEGLFSLLVF LGQPVNALLI GLFLSALLLK STNKIAEFSE
RISQGLVAAA PIILITGAGG AFGAVLKATP IGDFLGSSLS ALGVGIFMPF IVAAALKSAQ
GSSTVALVAT SALVAPMLGD IGLGSEMGRV LTVMAIGAGA MTVSHANDSF FWVVTQFSRM
SVTQAYKAQT MATLIQGVTS MLAVYVLSLV LL
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