| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1769 |
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| Symbol | |
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| ID | 1169543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1847732 |
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| End bp | 1849333 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343656 |
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| Product | glutamate decarboxylase, putative |
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| Protein accession | NP_717379 |
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| Protein GI | 24373336 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGATTT TCACTGTGCC CGAAGATGCA GATTCCACCT TAAGCATTAT CGAGCAGAAG
CTTTCCGAGG ATTTAGCAGG CTTTTTGGGT GACAGTATTG CCGCGCTAGA AAAGCCGCTA
TCAGAGATCG AAACCGATTT TCAAACCTTT GAAATTCCAA ACCAGCCGCG TTTTGTCTCC
GACTATACCG ACGAAATCAT GCAAAACTTG GTGGCGCATT CGGTGCATAC GGCGGCGCCG
AGTTTTATTG GCCATATGAC CTCGGCATTG CCCTATTTTG TGTTGCCACT GTCGAAAATG
ATGGTGGGGC TGAATCAAAA CTTGGTCAAA ATCGAAACGT CCAAGGCTTT TACCCCGCTT
GAGCGCCAAG TGCTCGGGAT GATGCATCAT TTAATTTACG CTCAACACGA TGATTTTTAT
CGTAATTGGA TGCACAGCGC CAATCATTCC CTTGGCGCAT TTTGCTCCGG CGGCACGGTC
GCTAACATCA CGGCCCTGTG GATTGCCCGT AACCAATTAC TTAAGGCCGA TGGCGACTTT
AAAGGCGTCA CCCGCGAAGG CTTAATCAAG GCGCTGCGTC ACTATGACTA TGATGATTTA
GCGATTCTTG TCTCCGAGCG CGGTCACTAT TCATTAGGTA AAGCAGTCGA TCTGCTCGGT
ATTGGTCGCG ACAATATCAT CAGTATCCCA ACCGATGCTG ATAACAAGGT TGATGTCACC
CAAATGCGTA AGATCGCAGT TGAACTTGCA CATAAACGCA TTAAAGTCAT GGCGATTGTG
GGTGTGGCTG GCACAACAGA GACGGGCAAT ATCGACCCGC TTAAGCAGCT TGCGGCATTA
GCAAGTGAGT TAAACTGTCA CTTCCATGTG GATGCGGCTT GGGGCGGCGC GAGCTTATTA
TCCAATAAAT ACCGCCATTT ACTCGATGGT GTTGAACTCG CAGATTCGGT CACCATCGAT
GCCCATAAGC AAATGTATGT CCCCATGGGC GCGGGTATGG TGCTATTTAA AAATCCTGAG
TTTGCCCATG CGATTGCCCA CCACGCCGAA TATATTTTGC GCCGAGGCTC CAAGGATTTA
GGCAGCCAAA CGCTTGAAGG CTCACGCCCC GGCATGGCGA TGTTAGTGCA TGCCTGCTTA
CAGATTATCG GTCGCGATGG CTACGAAATT CTTATCAATA ACAGCCTTGA AAAAGCGCGT
TATTTTGCCG AGCAAATCGA CGCGCACCCC GATTTTGAGT TAGTCACCGC GCCAGAGCTG
TGCCTGCTCA CCTATCGTTA TGTTCCAGCG AGTGTGCAGG CGGCGATGCA AGTGGCGATT
GAACAAGGTG ATAAAGCAAA GCTTGAGCGC TTTAATGAGC AACTCGATGG CCTGACCCAA
TTTATTCAAA AACACCAGCG CGAACAGGGC AAATCCTTTG TCTCGCGCAC CCGCATTCAA
CCCGCCCGCT ACTTTAGACA ACCCACAGTG GTGTTTCGCG TCGTATTAGC TAATCCCTTG
ACTAGCCATG AGATTCTGAA TCAAGTGCTT ATCGAGCAAG GCGAAATTGC CACATTGGAT
AAAGAGTTTT TACCCGCACT ATTAGCTATG GTCGCTGAAT AG
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| Protein sequence | MRIFTVPEDA DSTLSIIEQK LSEDLAGFLG DSIAALEKPL SEIETDFQTF EIPNQPRFVS
DYTDEIMQNL VAHSVHTAAP SFIGHMTSAL PYFVLPLSKM MVGLNQNLVK IETSKAFTPL
ERQVLGMMHH LIYAQHDDFY RNWMHSANHS LGAFCSGGTV ANITALWIAR NQLLKADGDF
KGVTREGLIK ALRHYDYDDL AILVSERGHY SLGKAVDLLG IGRDNIISIP TDADNKVDVT
QMRKIAVELA HKRIKVMAIV GVAGTTETGN IDPLKQLAAL ASELNCHFHV DAAWGGASLL
SNKYRHLLDG VELADSVTID AHKQMYVPMG AGMVLFKNPE FAHAIAHHAE YILRRGSKDL
GSQTLEGSRP GMAMLVHACL QIIGRDGYEI LINNSLEKAR YFAEQIDAHP DFELVTAPEL
CLLTYRYVPA SVQAAMQVAI EQGDKAKLER FNEQLDGLTQ FIQKHQREQG KSFVSRTRIQ
PARYFRQPTV VFRVVLANPL TSHEILNQVL IEQGEIATLD KEFLPALLAM VAE
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