Gene SO_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1750 
Symbol 
ID1169527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1830818 
End bp1831696 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content47% 
IMG OID637343640 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_717360 
Protein GI24373317 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACAA TTACTGATTT AACCAAAACC TACGATAACG GCGTTAGGGC GCTTGATGGG 
GTTAACTTAA CCATTTCTAA GGGTATGTTT GGGCTGCTTG GCCCTAATGG GGCGGGTAAA
TCCTCTCTCA TGCGTACGAT TGCTGCACTG CAAAGTGCTG ATAGTGGCAG CATCGTTTTC
GACGGGATTG ATGTGTTAGC TGATCCGCAG TCGTTACGCA AAACCTTAGG TTATTTACCG
CAGGACTTTA ATGTTTATCC GCGGATCAGT GCCTACGACT TGTTAGATCA TCTTGCGGTG
CTAAAAGGCA TTAATCAGAG CAAACAACGT AAAGAAATCG TGGAGGGTTT ACTGGCGCAT
ACTAACTTGT ATCAACATAA GAGTAAGGCG GTAAGTGGCT TTTCTGGGGG GATGAGGCAA
CGTTTTGGGA TTGCCCAGGC GTTACTTGGC GATCCTAAAT TATTGATTGT TGATGAGCCA
ACCGCAGGGC TCGATCCTGA AGAGCGCAAT CGCTTCCATA ACCTGTTGGT GAGCCTAGGT
GAGGAAAAAG TGGTGATCCT CTCGACTCAT ATTGTGGAAG ATGTGTCTGA GCTGTGCGCA
AATATGGCGG TGTTAGCCTC GGGGAAAATT TTATTACAGG GTAATCCACA ACAATTAGTG
AGCGAGTTAA CCGAAAAAAT TTGGACTAAA ACGGTTGATC AAGCTGAAGC TCAACAACTT
GAAAATACCT TACCTGTCAT TTCTAAACGA TTACTCGCAG GGCGAACCGT TCTGAATGTG
ATGGCCGAGA CGTGCCCAGA AGGTTTTACT CCCGCCGCCG CAGGGCTTGA GGATTTGTAT
TTCTCAACCT TGCATAGCCA TCGCCATCAG GCAGCTTAA
 
Protein sequence
MLTITDLTKT YDNGVRALDG VNLTISKGMF GLLGPNGAGK SSLMRTIAAL QSADSGSIVF 
DGIDVLADPQ SLRKTLGYLP QDFNVYPRIS AYDLLDHLAV LKGINQSKQR KEIVEGLLAH
TNLYQHKSKA VSGFSGGMRQ RFGIAQALLG DPKLLIVDEP TAGLDPEERN RFHNLLVSLG
EEKVVILSTH IVEDVSELCA NMAVLASGKI LLQGNPQQLV SELTEKIWTK TVDQAEAQQL
ENTLPVISKR LLAGRTVLNV MAETCPEGFT PAAAGLEDLY FSTLHSHRHQ AA