Gene SO_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1742 
Symbol 
ID1169520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1821611 
End bp1822660 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID637343633 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionNP_717352 
Protein GI24373309 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATT CCCGCGTATT TATTAATAGC CTTGCCTATG AACTGGCACC TGTGGTGGTT 
TCCAGTAGTG AGCTAGAATC TCGCCTCGCG CCTCTATATC AAAAATTTCG CATTCCCATG
GGGCAACTTG CGGCGTTGAC GGGTATCACT GAACGCCGTT GGTGGCCGAA AGGGCATCAA
TTATCCGATG GAGCGATTAA CGCAGCGCAT AAGGCCATTG CAGAAACGGG AATTGATGTG
GCTGAGCTGG GCGCGGTTGT CTATACCGGC GTGTGCCGTG ACCAACATGA ACCGGCTACC
GCCTGTCGTA TTGCAGCAGC ACTGGGTGTC TCTAAAGATA CGGCAATTTA CGATATCAGC
AATGCATGCC TTGGGGTGTT GTCAGGGATT TTAGACATAG CCAATCGTAT TGAGCTTGGT
CAAATTAAAG CGGGCATGGT GGTGTCCTGC GAATCGGCGC GGGATATTGT CGATGTGACC
ATTGATAACA TGCTCGCCGA TCCGACCATG CAGAATTTTG CCCAGTCGCT GGCGACCTTA
ACTGGCGGTT CGGGTGCGGT GGCGGTGATC CTCACCGATG GCAGCTTACC GCTGACCAAT
GTGCGTAAAC ACCAGCTACT TGGGGCTTCT CATTTATCTG CGCCGCAGCA CCATCAACTG
TGTCAGTGGG GTCTGCAGGA AGTAGGGCAC AATATTTACC GTGAGTTTAT GCGTACCGAC
GCGGTGACCT TACTGAAAGA AGGGGTCGAG CTGGCTAAGC ATACTTGGGA GCATTTCCTC
GCCCAGCGTA ATTGGCTGGT TGAGCAGGTT GATAAAGTGA TCTGCCATCA GGTCGGGGCC
TCAAACCGTA AGCAAGTATT GAGTGCGTTA AATATTCCAC CTGAAAAAGA ATTTCCAACA
TATCAACTGC TTGGCAATAT GGGCACAGTC TCTTTACCCG TCACTGCGGC CATGGCACAC
GATCAAGGCT TTTTACGCCC AGGCGATCAG GTGAGCTTTT TAGGTATCGG CAGTGGTTTG
AACTGCATGA TGCTGGGTAT TAAGTGGTAG
 
Protein sequence
MKYSRVFINS LAYELAPVVV SSSELESRLA PLYQKFRIPM GQLAALTGIT ERRWWPKGHQ 
LSDGAINAAH KAIAETGIDV AELGAVVYTG VCRDQHEPAT ACRIAAALGV SKDTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGMVVSC ESARDIVDVT IDNMLADPTM QNFAQSLATL
TGGSGAVAVI LTDGSLPLTN VRKHQLLGAS HLSAPQHHQL CQWGLQEVGH NIYREFMRTD
AVTLLKEGVE LAKHTWEHFL AQRNWLVEQV DKVICHQVGA SNRKQVLSAL NIPPEKEFPT
YQLLGNMGTV SLPVTAAMAH DQGFLRPGDQ VSFLGIGSGL NCMMLGIKW