Gene SO_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1716 
Symbol 
ID1169501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1803807 
End bp1804400 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content46% 
IMG OID637343614 
Productamino acid transporter LysE 
Protein accessionNP_717326 
Protein GI24373283 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA TACTCGCTAT CGCGTTGTTT GCCTTTTCAT CGGGGATCAC CCCAGGGCCT 
AACAATATTA TGTTGATGAC TTCAGGAGTA AACTTTGGTG TCAAACGCAG TATTCCGCAC 
CTGATGGGTA TTAGCCTTGG CTTCCCAACC ATGATCCTCG CAATCGGCTT AGGGCTAAGC 
GCGGTATTCC AAGCTTATCC CATTATTCAC CAAGTCATTA AAGTAATTGG GATTATTTAT 
CTTTTGTATC TTTCTTGGTT AATTGCCAAT AGCAGTAGCA AAATGGAGGG CAAGAGTATC 
GCTAAGCCCT TTAGCTTTTT GCAAGCCGCC GCATTTCAAT GGGTTAACCC TAAAGGTTGG 
ATTATGGCGG TGGGCGCGAT AGCCACTTTC ACCTCAGTAC AACAGGATCT CACGCCCCAA 
GTTGTCACCA TTGCCACGGT GTTTTTATGT GTGGCCTTTC CCTGCGCCGT TGTTTGGCTT 
GGGTTTGGTG TGGCGCTTAA ACGTATTTTG AAAAATGAAC GCCAGCAGAA GATCTTCAAT 
ATCACTATGG CTGTCTTGCT TGTGGCGTCT ATCATCCCTA TGATCACCCC CTAA
 
Protein sequence
MELILAIALF AFSSGITPGP NNIMLMTSGV NFGVKRSIPH LMGISLGFPT MILAIGLGLS 
AVFQAYPIIH QVIKVIGIIY LLYLSWLIAN SSSKMEGKSI AKPFSFLQAA AFQWVNPKGW 
IMAVGAIATF TSVQQDLTPQ VVTIATVFLC VAFPCAVVWL GFGVALKRIL KNERQQKIFN 
ITMAVLLVAS IIPMITP