Gene SO_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1690 
Symbol 
ID1169480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1777149 
End bp1778741 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content48% 
IMG OID637343594 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_717301 
Protein GI24373258 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCACTA CAGCGAATAT CACCATGCAG TTTGGCGCTA AGCCACTGTT TGAAAACATC 
TCAGTTAAAT TTGGCGGCGG TAACCGTTAC GGTCTTATCG GTGCGAACGG CTGCGGTAAA
TCAACCTTCA TGAAGATCCT TTGCGGTGAT CTAGAGCCGA GCAGCGGTAA TGTATCTTTA
GACGTCAATG AGCGTCTGGG TAAACTCAGC CAGAACCAAT TCGGTTACGA GGAATACACG
CTGATTGACA CAGTGATCAT GGGCCACCGT GAGCTGTGGA AGGTCAAGCA AGAGCGTGAC
CGTATCTACT CTTTGCCAGA GATGAGCGAA GAAGACGGCA TTGCCGTGGC AAACCTTGAA
ATGGAATTTG CAGAAATGGA CGGTTACACC GCCGAATCTC GTGCCGGTGA ACTGCTACTT
GGCGTAGGTA TCGGTATCGA AAGTCATTTC GGTCTAATGT CTGAAATTGC CCCAGGTTTA
AAACTGCGGG TGTTATTGGC GCAAGCCCTG TTCTCGGACC CTGATGTACT GCTGCTCGAC
GAACCCACCA ACAACTTGGA CATCGACACT ATCCGTTGGT TACAGGACGT CTTGAACCAA
CGCGACAGCA CCATGATCAT CATTTCGCAC GACCGTTACT TCTTAAACTC AGTCTGTACC
CATATGGCGG ACTTAGACTA CGGTGAACTG CGTGTTTACC CAGGTAACTA CGACGAATAT
ATGCAAGCTG CGACTCAGGC CCGTGAGCGT CTGCTGGCCG ATAACGCCAA GAAGAAAGCA
CAAATCTCTG AGCTGCAAAC CTTCGTGGCG CGCTTCTCTG CCAACGCTTC TAAGGCTAAA
CAAGCGACTT CGCGTGCGCG TCAAATCGAT AAGATCAAGT TGGATGAGGT TAAAGCCTCT
AGCCGTGTTA ACCCATTCAT TCGTTTCGAT CAGGAAAAGA AACTGTTCCG TAACGCTTTA
GTGGTTGAGA ATTTGGCTAA AGGTTACGAC ACCCCCCTGT TTAAAGACTT AAACCTGATT
GTCGAAGTGG GCGAGCGTAT CGCTATCCTC GGTGAGAACG GTGTAGGTAA AACCACGCTA
CTGCGTACTT TAATCCATGA TATTCCACAG GATGAAGGCC ATATCCAATG GTCTGAAAAC
AGTAATATCG GTTACTACGC GCAGGATCAT GAGTCTGATT TTGAAAACGA TATGACCCTC
TTCGAGTGGA TGAGCCAATG GCGTAAACCT GAAGATGATG ACCAAGCGGT GCGTGGTATT
TTAGGCCGTA TGCTGTTTAG CGCCGACGAT ATTAAAAAGT CAGTCAAAGT GCTGTCGGGT
GGTGAAAAGG GCCGTATGTT ATTTGGCAAG CTCATTATGC AAAAGCCAAA TATCCTGATG
CTCGACGAAC CGACTAACCA CATGGATATG GAATCGATTG AATCCTTAAA CAACGCGCTG
GAAAAATACG AAGGCACGCT GTTGTTTGTG AGTCACGACC GCGCATTCGT ATCGTCACTG
GCAAACCGTA TCCTTGAAAT CACGCCAAAC GGGGTGAATG ACTTCAAGGG CACCTACGAT
GAGTTCCTTG CGAGCAAGGG TATCGAAGGC TAA
 
Protein sequence
MITTANITMQ FGAKPLFENI SVKFGGGNRY GLIGANGCGK STFMKILCGD LEPSSGNVSL 
DVNERLGKLS QNQFGYEEYT LIDTVIMGHR ELWKVKQERD RIYSLPEMSE EDGIAVANLE
MEFAEMDGYT AESRAGELLL GVGIGIESHF GLMSEIAPGL KLRVLLAQAL FSDPDVLLLD
EPTNNLDIDT IRWLQDVLNQ RDSTMIIISH DRYFLNSVCT HMADLDYGEL RVYPGNYDEY
MQAATQARER LLADNAKKKA QISELQTFVA RFSANASKAK QATSRARQID KIKLDEVKAS
SRVNPFIRFD QEKKLFRNAL VVENLAKGYD TPLFKDLNLI VEVGERIAIL GENGVGKTTL
LRTLIHDIPQ DEGHIQWSEN SNIGYYAQDH ESDFENDMTL FEWMSQWRKP EDDDQAVRGI
LGRMLFSADD IKKSVKVLSG GEKGRMLFGK LIMQKPNILM LDEPTNHMDM ESIESLNNAL
EKYEGTLLFV SHDRAFVSSL ANRILEITPN GVNDFKGTYD EFLASKGIEG