| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1678 |
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| Symbol | mmsA |
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| ID | 1169470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1764510 |
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| End bp | 1766009 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637343584 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | NP_717289 |
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| Protein GI | 24373246 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACAC AAGTTAAGCA TTACATTGAT GGCGAATTCA CTGCAGGCAC GGGTACATCA
CAAATCGTGG TGACCAATCC TGCCAATAAC GCGACGATTG CCGTTATTAA TAGCGCCACG
GCCGATGAAG TCCATGCGGC CATTGCCAGT GCCAAGGCGG CCTTTAAAAC ATGGAAAGAA
GTGCCTGTCT CTGAGCGTGC CCGTGTCATG TTGCGCTACC AACACTTACT AAAAGAGCAC
CACGATGAGT TAGCGACCAT CCTTGCCCAT GAAACCGGTA AAACCTTTGA AGATGCCAAG
GGCGATGTCT GGCGCGGGAT TGAAGTGGCG GAACATGCCT GCAACATTGC CTCATTACTG
ATGGGTGAAA CCGTTGAAAA CGTTGCACGT TCTATCGATA CCTACAGCTA CACTCAGCCT
CTTGGTGTGT GTGCGGGTAT CACGCCGTTT AACTTCCCTG CGATGATCCC TTTGTGGATG
TTCCCACTGG CGATTGCCTG CGGTAACACT TTCATCCTTA AGCCATCAGA GCAAGACCCT
ATGACGCCGC AGCGTTTAGT TGAGCTATTT GTCGAAGCGG GCGCGCCAAA GGGCGTACTG
CAACTGATCC ATGGTGATAA GACGGCGGTG GATATTCTAC TGGCAGACCC TGCGGTTAAG
GCGATTTCCT TCGTGGGCTC CGTCGCTGTT GGCCAATACA TCTACAAAAC CGGTACCGAT
AACTTAAAAC GCGTGCAAGC CTTTGCAGGG GCAAAAAACC ACTGCGTGAT CATGCCTGAT
GCAAACAAAC AGCAAGTGAT CAACAACTTA GTCGGCGCTT CTGTCGGCGC GGCGGGGCAA
CGCTGTATGG CTATTTCGGT CGCGGTATTT GTCGGCGCAG CTAAAGAGTG GATCCCAGAG
CTCAAAGAAG CGCTGGCGAA GGTTCGCCCA GGTTTATGGG ACGATAAAGA CGCCGGTTAC
GGTCCGCTGA TAAGCCCTGC TGCCAAAGTG CGCGTGCTCA AACTTATCGC CCAAGGTAAG
GAAGAGGGCG CGCAGTGTTT ACTCGATGGC AGTGATTTTA CTGTGGCGGG TTTCGAGTCC
GGCAACTGGG TAGGACCTAC CATGTTCACT AAGGTCACGA CCGATATGAG CATCTACAAA
GAAGAAATCT TTGGCCCCGT GCTCTGCTGT ATGGAATCCG ATTCATTAGA AGATGCGATC
GAACTCGTTA ACGCCAGCCC CTACGGCAAT GGCACGTCTA TTTTTACCGC AAGCGGCGCT
GCGGCGCGTA AATATCAACA CGAAATCGAA GTCGGCCAAG TGGGCATTAA CGTGCCTATC
CCTGTGCCAT TACCTTTCTT CTCGTTCACC GGTTGGAAGG GCAGTTTTTA CGGCGACCAA
CACGCCTACG GTAAGCAAGC GGTGCGTTTC TACACTGAAA CTAAAACCAT TACCGCTCGC
TGGTTCGAGT CGGACATTGC GGTGGCCGCT GGCCCTAATA TGAGCATTAA CTTGCGCTAA
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| Protein sequence | MTTQVKHYID GEFTAGTGTS QIVVTNPANN ATIAVINSAT ADEVHAAIAS AKAAFKTWKE
VPVSERARVM LRYQHLLKEH HDELATILAH ETGKTFEDAK GDVWRGIEVA EHACNIASLL
MGETVENVAR SIDTYSYTQP LGVCAGITPF NFPAMIPLWM FPLAIACGNT FILKPSEQDP
MTPQRLVELF VEAGAPKGVL QLIHGDKTAV DILLADPAVK AISFVGSVAV GQYIYKTGTD
NLKRVQAFAG AKNHCVIMPD ANKQQVINNL VGASVGAAGQ RCMAISVAVF VGAAKEWIPE
LKEALAKVRP GLWDDKDAGY GPLISPAAKV RVLKLIAQGK EEGAQCLLDG SDFTVAGFES
GNWVGPTMFT KVTTDMSIYK EEIFGPVLCC MESDSLEDAI ELVNASPYGN GTSIFTASGA
AARKYQHEIE VGQVGINVPI PVPLPFFSFT GWKGSFYGDQ HAYGKQAVRF YTETKTITAR
WFESDIAVAA GPNMSINLR
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