| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1676 |
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| Symbol | metA |
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| ID | 1169468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1761811 |
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| End bp | 1762752 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343582 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | NP_717287 |
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| Protein GI | 24373244 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAGTTA AAATTCCAGA TCATCTGCCT GCAGCAGGGA TTTTAGAATC TGAAAATATT
TTCGTAATGT CCGAAACTCG GGCTGCAAAT CAAGATATCA GGCCAATGAA GGTACTGATT
TTGAATTTGA TGCCCAATAA AATCGAGACC GAAACCCAGC TTTTACGCCT ATTGGGTAAT
ACTCCGTTAC AGGTGGATGT GGATTTACTG CGTATCCACG ATAAAGAGTC GAAACACACC
TCAATCGATC ATATGAACAC CTTCTACCGT GATTTTGAGG ATGTGCGCCA TAAAAACTAC
GACGGCCTGA TCATCACGGG GGCGCCCCTT GGACAAATCG ATTTTGAGGA TGTGACTTAC
TGGGATCATA TCCGCGAGAT TATCGATTGG TCACAGCAGC ATGTAACCTC GGTGCTCTTT
CTTTGCTGGG CGGCCCATGC GGGGCTTTAC CATCTCTATG GATTAAATCG TAAAATCCTT
GAGCAAAAGC GTTCTGGCGT ATTTGTCCAC CGCCGTACCT GCCAGCATTT CCCGCTGCTG
CGCGGATTTG ATGATGAGTT CTTTGCGCCC CATTCGCGCT TTGCCGAGAT GGATGTCGAG
GAGATTAGGC AACATCCACA GTTGCAGTTA TTGGCCGAGT CTGATGAGGC GGGGGCTTAT
TTGGTATTAA GTCGCAATAA TCGCAACTTG TTTGTCATGG GTCACCCTGA GTATCAAAAA
TCCACCCTAA ACGATGAATA TCATCGGGAT TTGGCGCAGA GCTTAAACCC AAATGTGCCA
CAAAACTATT ATCGTAACGA TGATCCTAAG GCCGATGCCA TTGCCCGTTG GCACAGCCAT
GGCAGTTTGT TGGTCAGTAA TTGGCTTAAC TATTACGTTT ACCAATTAAC GCCTTACGAC
CTGAGTGATA TGACGGCGAT GACACCATGG GAATCGCAGT AG
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| Protein sequence | MPVKIPDHLP AAGILESENI FVMSETRAAN QDIRPMKVLI LNLMPNKIET ETQLLRLLGN
TPLQVDVDLL RIHDKESKHT SIDHMNTFYR DFEDVRHKNY DGLIITGAPL GQIDFEDVTY
WDHIREIIDW SQQHVTSVLF LCWAAHAGLY HLYGLNRKIL EQKRSGVFVH RRTCQHFPLL
RGFDDEFFAP HSRFAEMDVE EIRQHPQLQL LAESDEAGAY LVLSRNNRNL FVMGHPEYQK
STLNDEYHRD LAQSLNPNVP QNYYRNDDPK ADAIARWHSH GSLLVSNWLN YYVYQLTPYD
LSDMTAMTPW ESQ
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