Gene SO_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1673 
Symbol 
ID1169465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1759718 
End bp1760362 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content41% 
IMG OID637343579 
Productouter membrane protein W 
Protein accessionNP_717284 
Protein GI24373241 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA CTACTGTTTC TACACTGATC GCTGCCACCC TGTTAGCTGC TGGTTTCTCT 
GCTTCTGTTT CTGCCCACCA AGCAGGCGAT ATTATTGTTC GTGCTGGTGC AGTGGTTGTT
GCGCCAAATG AATCGAGTGA TGATGTTGCA GGTAATGGTG AGTTTCAAAT TAGCAATAAC
ACTCAACTAG GCTTAAATTT TGGTTATATG CTGACCGATA ATTTTGGTGT AGAGCTATTA
GCTGCGACAC CTTTTAGCCA TGATGTATCT TTAGCTGGTA TTGGCAAAAT TGCAGAAACG
AAACATTTAC CTCCAACTCT AGTGGCGCAG TATTATTTCG GTAATGCCCA ATCTACATTA
CGTCCATATG TGGGCGTTGG TGTGAACTAC ACTAACTTCT TCGACAATGA ATTCACTAAC
GATTTAAATG GCGCGTTAAC TGACTTAAGC ATGAGCACTT CATGGGGCTT AGCGGCTCAA
GTGGGTCTGG ATTACCAAGT CAATAAAAAC TGGTTAGTGA ACGCTTCAGT ATGGTATGCC
CAGATTAGCA CTGATGTAGA ATTTAAATTG GGTGGTAAAC CAGTGACTAT TGAAACAGAT
ATTAACCCAT GGGTTTATAT GGTTAGCGTG GGTTACACTT TCTAA
 
Protein sequence
MNKTTVSTLI AATLLAAGFS ASVSAHQAGD IIVRAGAVVV APNESSDDVA GNGEFQISNN 
TQLGLNFGYM LTDNFGVELL AATPFSHDVS LAGIGKIAET KHLPPTLVAQ YYFGNAQSTL
RPYVGVGVNY TNFFDNEFTN DLNGALTDLS MSTSWGLAAQ VGLDYQVNKN WLVNASVWYA
QISTDVEFKL GGKPVTIETD INPWVYMVSV GYTF