Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1673 |
Symbol | |
ID | 1169465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1759718 |
End bp | 1760362 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637343579 |
Product | outer membrane protein W |
Protein accession | NP_717284 |
Protein GI | 24373241 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA CTACTGTTTC TACACTGATC GCTGCCACCC TGTTAGCTGC TGGTTTCTCT GCTTCTGTTT CTGCCCACCA AGCAGGCGAT ATTATTGTTC GTGCTGGTGC AGTGGTTGTT GCGCCAAATG AATCGAGTGA TGATGTTGCA GGTAATGGTG AGTTTCAAAT TAGCAATAAC ACTCAACTAG GCTTAAATTT TGGTTATATG CTGACCGATA ATTTTGGTGT AGAGCTATTA GCTGCGACAC CTTTTAGCCA TGATGTATCT TTAGCTGGTA TTGGCAAAAT TGCAGAAACG AAACATTTAC CTCCAACTCT AGTGGCGCAG TATTATTTCG GTAATGCCCA ATCTACATTA CGTCCATATG TGGGCGTTGG TGTGAACTAC ACTAACTTCT TCGACAATGA ATTCACTAAC GATTTAAATG GCGCGTTAAC TGACTTAAGC ATGAGCACTT CATGGGGCTT AGCGGCTCAA GTGGGTCTGG ATTACCAAGT CAATAAAAAC TGGTTAGTGA ACGCTTCAGT ATGGTATGCC CAGATTAGCA CTGATGTAGA ATTTAAATTG GGTGGTAAAC CAGTGACTAT TGAAACAGAT ATTAACCCAT GGGTTTATAT GGTTAGCGTG GGTTACACTT TCTAA
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Protein sequence | MNKTTVSTLI AATLLAAGFS ASVSAHQAGD IIVRAGAVVV APNESSDDVA GNGEFQISNN TQLGLNFGYM LTDNFGVELL AATPFSHDVS LAGIGKIAET KHLPPTLVAQ YYFGNAQSTL RPYVGVGVNY TNFFDNEFTN DLNGALTDLS MSTSWGLAAQ VGLDYQVNKN WLVNASVWYA QISTDVEFKL GGKPVTIETD INPWVYMVSV GYTF
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