Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1656 |
Symbol | |
ID | 1169450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1743565 |
End bp | 1744485 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637343564 |
Product | fructokinase |
Protein accession | NP_717267 |
Protein GI | 24373224 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATACGCA TGGGCATCGA TTTAGGTGGT ACTAAAATAG AACTCGTCGC CTTAAATAAC GAAGGAAATG AGGTTGTTCG CAAGCGTATC AATACCCCTC GGGATTATCA GGGCACACTT AACGCGATTG TAGATTTAGT CAACGAAGCT GAATCCACTT TAGGTGAAAA GGGCTCGGTG GGTGTAGGTA TTCCAGGTGT TATATCCCCC TATTCTGGGT TGGTTAAAAA TGCCAATTCA ACTTGGATCA ACGGTCATCC CCTCGATGTG CATTTAGGGG AGCTCTTAGG CCGTGAAGTG CGTGTTGCCA ATGATGCCAA CTGTTTTGCC TTATCAGAGG CGGTTGATGG GGCTGCAGCG GGTAAGTCAG TCGTGTTTGG CGTCATCATT GGCACAGGCT GCGGTGCAGG GGTTGCAATT AACGGTAAAG TGCACGCTGG TGGTAATGGT ATCGGCGGTG AGTGGGGGCA TAATCCATTG CCGTGGATGA CCAAGGAGGA GTTTAATACC ACCCGTTGTT TTTGCGGTAA TCCTGATTGT ATCGAAACCT TTATTTCAGG TACTGGTTTT GTCCGAGATT ACAATGAGGC GCTCAGTCGC GCAGCAAGCG TCCAACGTGT GCCCGCTAAA TCTGGTTCAG AGATCATGAG CTTAGTCGAT GGGGGCGATG AGATTGCCTT AGCTGCCTTT GAACGCTATG TGGATAGGCT CGCGCGCTCA CTGGCTCATG TGATTAATCT ACTTGATCCT GATGCGATTG TGTTAGGTGG CGGCATGTCG AATGTTGAGG CTATTTACCC AAGATTACCT GCATTATTAA GCCATTATGT TGTAGGGCGC GAATGCCGAA CACCAGTTGT GCAGAATCTT TATGGCTGCT CTTCCGGCGT GCGTGGCGCT GCGTGGTTAT GGGAAAAATA A
|
Protein sequence | MIRMGIDLGG TKIELVALNN EGNEVVRKRI NTPRDYQGTL NAIVDLVNEA ESTLGEKGSV GVGIPGVISP YSGLVKNANS TWINGHPLDV HLGELLGREV RVANDANCFA LSEAVDGAAA GKSVVFGVII GTGCGAGVAI NGKVHAGGNG IGGEWGHNPL PWMTKEEFNT TRCFCGNPDC IETFISGTGF VRDYNEALSR AASVQRVPAK SGSEIMSLVD GGDEIALAAF ERYVDRLARS LAHVINLLDP DAIVLGGGMS NVEAIYPRLP ALLSHYVVGR ECRTPVVQNL YGCSSGVRGA AWLWEK
|
| |