Gene SO_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1650 
Symbol 
ID1169444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1736303 
End bp1736986 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content48% 
IMG OID637343558 
Producthypothetical protein 
Protein accessionNP_717261 
Protein GI24373218 
COG category[S] Function unknown 
COG ID[COG4805] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTGG TGCGTATCCC TGAATTTAAA GAGAAAACGG CTCCTGGTGC TTATTATCAG 
CAACCGGCGA TTGACGGCAG CCGCCCTGGA CGTTTTTATG CCAATCTCTT TGATATTAAA 
GCAACGCCTA AATATGGTAT GCGCACGCTA GCCTACCATG AGGGGATCCC TGGACATCAT 
TTTCAGGTTG CTGTCGCGAT GGAGCTTGAA GGACAACCGC TTATTCGCAA GATGGCGCCT 
TTTACTGCTT ATATTGAAGG TTGGGCGCTC TATAGCGAAC GTGTAGCTTG GGAACTCGGT 
TTCCAGCAAG ATCCCTTTGA TAATATTGGT CGCTTGCAGG CGGAATTGTT TAGAGCAGTG 
CGCCTCGTTG TTGATACGGG TATTCACCAT AGCCGTTGGA CGCGGGAGCA AGCTATTGAC 
TATATGAAGA AAAATACCGG AATGTCAGAC CGCGATGTGA CGGCTGAAAT TGAGCGTTAT 
ATTGTGATGC CCGGCCAAGC TACGGCCTAT AAGGTGGGGA TGATGAAGAT CCTCGAACTG 
CGGGAAAAAG CCAAACAAGC CCTTGGGGAT AAGTTTGACT TGCGGGATTT TCACGATGTG 
GTGCTGAAAA ATGGCGCTGT TCCCTTAGAT ATTTTAGAAA AATTGGTTGA CCGTTATATC 
GCCGATAAGC GCAGCCAAGC CTAA
 
Protein sequence
MEVVRIPEFK EKTAPGAYYQ QPAIDGSRPG RFYANLFDIK ATPKYGMRTL AYHEGIPGHH 
FQVAVAMELE GQPLIRKMAP FTAYIEGWAL YSERVAWELG FQQDPFDNIG RLQAELFRAV 
RLVVDTGIHH SRWTREQAID YMKKNTGMSD RDVTAEIERY IVMPGQATAY KVGMMKILEL 
REKAKQALGD KFDLRDFHDV VLKNGAVPLD ILEKLVDRYI ADKRSQA