| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1636 |
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| Symbol | |
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| ID | 1169430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1717535 |
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| End bp | 1718905 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343544 |
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| Product | membrane-associated zinc metalloprotease, putative |
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| Protein accession | NP_717247 |
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| Protein GI | 24373204 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGATT TTTTGTGGAA CTTAGGTTCT TTTATCGTAG CGCTTGGGCT GTTGATTACT
GCCCACGAAT ACGGCCATTT CTATGTTGCA CGCCGCTGTG GTGTGAAAGT TGAACGTTTT
TCGATAGGTT TTGGTAAGAC GATTTGGCGC AAAGTGGGTA AGGATGGCAC TGAATATGTC
GTTGCCATGA TCCCGCTGGG TGGCTATGTC AAAATGCTCG ATGAGCGCGT TGAAGATGTC
CCCGAAGAGT TAAAGGACCA AGCCTTTAAC CGTAAAAGTG TGTGGCAACG CATTGCCATT
GTGGCGGCAG GCCCTATTGC CAACTTTATC TTTGCGATTA TCGCACTGTA TTTTATGTAT
TTAATTGGCG TGCCATCGCT AAAGCCCGTC ATTACCTCAA CCACGCCCGG CAGCGCAGCT
GCGCAAATAA AGGTGAATGA GCCGATGCAA GTGACGGCGA TTTCTGGCCA AGCAGTACGA
AATTGGGAAG AAGTCAATTT AGCCCTTGTT GGTCATATTG GTGATGACAG TTTAACCGTG
TCTCTCGCGC CGCTAAGTGG TTTGCAGGGG TTAGACACTG ATACTCGCAC CTACACCTTA
GATACCCGTC AATGGCGGTT TGACCCTGAA AAAGAGTCAC CGATAACTAC CCTAGGTTTG
GGGGTTTATC GCCCTGCGAT TGAACCGCAA ATTGCGCTCA TCAGCGAAGG CAGTGCAGCT
GCAAACAGTG ATCTCAAAGT CGGTGATACT TTAGTTGCTA TAAATGGTCA GCAATATACT
GACTGGCAAG CTTTTGTTGA CATTATTCAG CATTCTGCCA ATGTGCCAGT GGAGTTAACA
GTGCGCCGTA ATGGCGAACA GTTTGCCATC TCAGTGACTC CTGCGAGTAT TAAAAATAGT
GATGGCAAGG AGATAGGCGT GCTTGGCGTG AGCCCGACTC AGGCACAATG GCCTGAGAAT
ATGCGTCTGC AACTCGAATA TGGCCCAATC GATTCTTTTG CTATTGCAGC CGATAAAACA
TGGCAACTTG TTGCTGTGAG CTTTAAGATG ATTGGCAAAT TATTTACTGG CGATGTGTCA
GTGAAAAACT TAAGTGGACC TATCTCAATC GCACAGGGTG CGGGCAATAG TGCAAACTAT
GGCTTGGTTT ACTTTCTCGG TTTCCTCGCG CTTATCAGTG TCAATTTAGG CATCATTAAC
CTGCTGCCAT TGCCTGTGCT CGATGGGGGA CATCTGCTGT ATTACTTCGT TGAAGTCATT
ACAGGTAAGC CTGTGTCTGA AAAGGTACAG GAAATAGGAT TCAGATTTGG GGCAGCATTA
CTGCTGATGT TGATGAGCAT TGCGCTCTTC AACGATTTTG CCCGACTCTG A
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| Protein sequence | MLDFLWNLGS FIVALGLLIT AHEYGHFYVA RRCGVKVERF SIGFGKTIWR KVGKDGTEYV
VAMIPLGGYV KMLDERVEDV PEELKDQAFN RKSVWQRIAI VAAGPIANFI FAIIALYFMY
LIGVPSLKPV ITSTTPGSAA AQIKVNEPMQ VTAISGQAVR NWEEVNLALV GHIGDDSLTV
SLAPLSGLQG LDTDTRTYTL DTRQWRFDPE KESPITTLGL GVYRPAIEPQ IALISEGSAA
ANSDLKVGDT LVAINGQQYT DWQAFVDIIQ HSANVPVELT VRRNGEQFAI SVTPASIKNS
DGKEIGVLGV SPTQAQWPEN MRLQLEYGPI DSFAIAADKT WQLVAVSFKM IGKLFTGDVS
VKNLSGPISI AQGAGNSANY GLVYFLGFLA LISVNLGIIN LLPLPVLDGG HLLYYFVEVI
TGKPVSEKVQ EIGFRFGAAL LLMLMSIALF NDFARL
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