| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1633 |
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| Symbol | uppS |
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| ID | 1169427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1714583 |
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| End bp | 1715410 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343541 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | NP_717244 |
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| Protein GI | 24373201 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCCA CAGTGGAATT TGATCCGCAA TCTAGGCCGA CTGAGGCGGA TGCTTATGCT
CAGACAAGCT TACCGGAGGT ATTACCCGAA CTCGTTAAAC AGTCATTACC TAAGCATGTT
GCGATTATTA TGGATGGTAA TGGACGTTGG GCCCAAACCC AGGGCAAACC ACGAGTGATG
GGGCATAAGG CCGGGGTTAA AGCGGTGAGA CGTGCGGTGA GCGCGGCCAG TCAGTTAGGG
ATACAATCGC TAACGCTATT TGCGTTTTCT AGCGAAAATT GGCGTAGACC CGATAAAGAA
GTCAGCTTGT TGATGGAACT GTTTTTTACT GTGCTACAGC GGGAAATTAA GTTACTCGAT
AAGAACCAAG TCAAACTGAA TATCATTGGT GATATCAGCC GTTTTTCTGC GCGTTTACAA
AAGCAAATTC GTGCCGCAGA AGAAAAAACT GCAGGCAACA GCGGATTGAT ATTGAATGTG
GCGGCCAATT ACGGTGGTCG CTGGGACATA CTGCAAGCTG CGCAAAAGTT AGCTGAAAAG
GTTGAAACTG GTGAAATGAC CAGCAGTCAG TTCACTGAAG AAGCCTTGAG TGAACATTTG
TGCATGCAAA ATCAGAGTGA AGTTGATTTA ATAATCCGTA CGGGGGGGGA TTACCGGATC
AGCAATTTTG TACTCTGGCA GGCAGCCTAT GCTGAGTTGG TGTTTTTGGA CACCCTTTGG
CCTGATTTTG ATGAGCAGGC TTTTCATGAA GCGATTGCCA CGTTTGCCAA TCGCCAGCGC
CGTTTTGGTT TGACCGGAAG TCAAATTGAT GAGATGCGCG CATTGTAA
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| Protein sequence | MSSTVEFDPQ SRPTEADAYA QTSLPEVLPE LVKQSLPKHV AIIMDGNGRW AQTQGKPRVM
GHKAGVKAVR RAVSAASQLG IQSLTLFAFS SENWRRPDKE VSLLMELFFT VLQREIKLLD
KNQVKLNIIG DISRFSARLQ KQIRAAEEKT AGNSGLILNV AANYGGRWDI LQAAQKLAEK
VETGEMTSSQ FTEEALSEHL CMQNQSEVDL IIRTGGDYRI SNFVLWQAAY AELVFLDTLW
PDFDEQAFHE AIATFANRQR RFGLTGSQID EMRAL
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