Gene SO_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1630 
Symboltsf 
ID1169424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1712262 
End bp1713113 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content45% 
IMG OID637343538 
Productelongation factor Ts 
Protein accessionNP_717241 
Protein GI24373198 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATTT CTGCTGCCCA AGTTAAAGAA CTGCGCGAGC GTACTGGCGC AGGCATGATG 
GATTGTAAAA AAGCGTTAGA AGAAACCAAC GGCGACATGG AGTTAGCAAT TGACAACATG
CGTAAGTCTG GTGCTGCTAA AGCTGCTAAG AAAGCAGGTA ACATCGCTGC TGACGGTACT
ATCCTGATCA AAAACGGTGA AGGTTTCGCA GTACTGCTAG AAGTAAACTG CCAAACTGAC
TTCGTTGCTA AAGATGCGAA CTTCTTAGGT TTTGCTAACG CTGTTTTAGA CGTTGCTGCA
GCGTCTAAAG TGACTTTAGA AGACTTAAAA GCCCAATTCG AAGAAGCCCG TGTTGCTCTG
GTTGCTAAAA TCGGTGAAAA CATCAACGTT CGTCGCGTTG AGTACATCGA CGGCGCAAAA
TTAGCATCTT ACCGTCACGG TGAGCGTATC GGTGTAGTAG TAACTGGTGA CGCTGATGAG
GAAACTCTGA AGCACCTAGC TATGCACGTT GCTGCTTCTA AGCCAGAATA CGTTAACCCA
GAAGACGTTC CAGCTGACGT AGTTGCTCGT GAACAAGCTC TACAAATCGA AATCTCTATG
AATGAAGGCA AACCTGCTGA CATCGCAGAG AAAATGGTTG TTGGTCGTAT GAAGAAGTTC
ACCGGTGAGA TCTCTCTGAC TGGTCAAGCT TACATCATGG AACCAAAGAA AACTGTTGGC
GAATTCTTGA AAGAGAAAGG CGCTAAAGTC ACTAACTTCA TCCGTTTAGA AGTTGGTGAA
GGTATTGAGA AGAAAGAAGA AGATTTCGCA GCTGAAGTTG CTGCTCAAAT CGCTGCTTCT
AAAAAGGCTT AA
 
Protein sequence
MAISAAQVKE LRERTGAGMM DCKKALEETN GDMELAIDNM RKSGAAKAAK KAGNIAADGT 
ILIKNGEGFA VLLEVNCQTD FVAKDANFLG FANAVLDVAA ASKVTLEDLK AQFEEARVAL
VAKIGENINV RRVEYIDGAK LASYRHGERI GVVVTGDADE ETLKHLAMHV AASKPEYVNP
EDVPADVVAR EQALQIEISM NEGKPADIAE KMVVGRMKKF TGEISLTGQA YIMEPKKTVG
EFLKEKGAKV TNFIRLEVGE GIEKKEEDFA AEVAAQIAAS KKA