| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1627 |
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| Symbol | map |
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| ID | 1169422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1710307 |
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| End bp | 1711104 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343536 |
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| Product | methionine aminopeptidase |
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| Protein accession | NP_717238 |
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| Protein GI | 24373195 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTATCG TCATTAAGAC AGCAGAAGAA ATCGAGAAAA TGCGCGCGGC GGGTAAGCTT
GCGGCGCAGG TGTTAGAAAT GATCGCGCCC TATGTTAAGG TGGGGGTCAG CACTAATGAA
TTGAACGATA TCTGCGCAAA ATATACCGAA GAGCAAGGCG CGATTTCTGC TCCGCTCAAC
TATCATGGTT TTCCAAAATC TATCTGTACT TCGTTAAACA ACGTGATTTG CCACGGAATC
CCGAGCGATC GCGTTTTAAA GGATGGCGAT ATTCTCAACA TCGATATCAC TGTTATTAAA
GATGGTTACC ACGGCGATAC CTCTAAAATG TTCTTAATTG GTGAGGTGAG TCCTAAGGAC
AAGCGTCTGT GCCGCATCGC CCAAGAGAGT TTATATCTTG CCATTCGTAA GGTTCGTCCA
GGGTTAAAAC TGGGCGAAAT CGGCAATACT ATTGAAAAAT TCATCAAAGC CAGCAAAACA
GGCCTTGAGA AATATTCCAT CGTGCAAGAT TATTGTGGCC ACGGTATTGG CGCGGGTTTC
CATGAAGAAC CTCAAGTGAT GCACTACCGC AATGGTGACA ACACCATTTT ACGCCCAGGC
ATGTGCTTTA CCATTGAGCC GATGATCAAC GCAGGTCGCC ACACCACTGT GCTAGACCGC
AATGATAATT GGACGGTGAC CACCTCCGAT GGTAAAAACT CAGCCCAGTG GGAACACACG
CTATTAGTAA CACAAACTGG TGTCGAAGTA CTGACGCTGC GCGATGAGGA AGATTTCCCA
CGCGTGATTA ATTACTAA
|
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| Protein sequence | MSIVIKTAEE IEKMRAAGKL AAQVLEMIAP YVKVGVSTNE LNDICAKYTE EQGAISAPLN
YHGFPKSICT SLNNVICHGI PSDRVLKDGD ILNIDITVIK DGYHGDTSKM FLIGEVSPKD
KRLCRIAQES LYLAIRKVRP GLKLGEIGNT IEKFIKASKT GLEKYSIVQD YCGHGIGAGF
HEEPQVMHYR NGDNTILRPG MCFTIEPMIN AGRHTTVLDR NDNWTVTTSD GKNSAQWEHT
LLVTQTGVEV LTLRDEEDFP RVINY
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