Gene SO_1626 details

Gene Information

• Locus tag: SO_1626
• Symbol: glnD
• ID: 1169421
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 1707639
• End bp: 1710224
• Gene Length: 2586 bp
• Protein Length: 861 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637343535
• Product: PII uridylyl-transferase
• Protein accession: NP_717237
• Protein GI: 24373194
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2844] UTP:GlnB (protein PII) uridylyltransferase
• TIGRFAM ID: [TIGR01693] [Protein-PII] uridylyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACAG CGCTGCTAGC AAAACAATCA TTAATCGAAC AGAATCAAAC GCTTTTAGCA 
AGATTCAAAG CCAAAACCCC GATTGAAGAG CTAGTCACTC AGCGCTGTCA GTTTGTTGAT 
TCCCTCGTTA AACAGGCCTG GCAACAGCAT GGCCTAGACC AATACCCCAT CGCCCTGATC 
GCCGTTGGCG GTTACGGCCG AGGAGAGCTG CATCCTCACT CGGATGTCGA CCTGTTATTT 
CTCTTCGAAG GTGAATTATC TAAAGCTGCT GAAACCACGC TCAGCGAATT TATCGCTTTT 
TTGTGGGACG CAAATCTCGA GATAGGTCAT AGCGTTCGCA CCCTCGATGA TACTTTGCGC 
CTTGGTCGAG ACGACATTAC CATTGCCACC AACTTGCTTG AGGCGCGCTT GCTCACAGGG 
CCTGAAACCT TATTTGACCA GCTCTATGAT GCTATTCGTC AAAGCGATTT TTGGACTTCA 
AGCAACTTTT TTATCGCCAA GCGCGATGAG CAAACGGCCC GCCATGCCAA GGCGAGTGCC 
TTTGATCTTG AGCCCAATAT CAAAAGTTGT CCGGGCGGGC TTCGGGATAT TCAAACCATC 
GCCTGGGTCG CCATGCGCCA CTTTGGCGCC TCGCGCCTAG AAGAACTGGT TGAATATGAG 
TTTTTAGAAC CCGCCGAATT AGAAGAGTTG CTCGAGTGTC AGCATTTTTT ATGGAAGCTG 
CGTTTTGCCC TGCATATGGC TGTAGGCCGT GATGAAAACC GCCTGCTGTT TGATGTACAG 
CGTCAAGTAG CCGAGTTGAT GGGGTACGAA GACGCCACCC AACTTGCCGT TGAGCAAATG 
ATGAAACGAT ACTATCGCAC GGTACGCCGA GTGATGGAAC TCAACGAAAT GCTCCTGCAA 
CTGTTTAAGC GGGCAACCCT TGGCCATACT AAAGCACTAG AAATCCAAGC CATTGATGAT 
AACTATCAGC GCCGTGGCGC CTTTATCGAA GCGTTAAGCG ACGATCTATT CGATAGCGGC 
GAAGAAATTG TGCGTTTGTT TGTGCATATT GCCAAAAACT CCAATATTAA AGGCATTTAT 
GCGCCAACAC TTCGCTCACT AAGGCGTGCA CGCCGGGCGC AGCTACAACC TTTACAAGAA 
AATCCACTGT GCCGCCAAGC CTTTATGGAG ATATTAAAGC ATCCACGCGG TATTGCAGCG 
TTATCACTTA TGCATAAACA CGGGGTGCTC TCAGCCTATT TACCTGCTTG GCGTAATATT 
GAAGGCCAAA TGCAATTTGA CCTGTTCCAC GCCTATACGG TCGATGAACA CACCCACAGA 
TTGCTGCTCA ATATCGAACG CTTCTCGCAG CCAGAACAAA AAGAAGAGTT TCCGTTAGGC 
TCAGTGCTCA TTAATCAGCT GCCGAAAAAA GGCTTGTTGG TGCTCGGCGC CATTTTCCAC 
GATATCGCTA AAGGTCGCGG CGGCGATCAC AGCAAACTGG GATCAAGCGA TGCCCTCGCC 
TTCTGTAAAC TCCATGGCTT AAATGACCAC GATGGCCGCT TAGTCGCTTG GCTGGTTGAG 
AATCACTTAG TGATGTCGGT GACCGCCCAG CGCCGTGATA TTTCTGATCC CGATGTCGTC 
GCGGACTTTG CGAGTAAAGT CCGCGATGCG GTGCATTTAA GTTATTTGTA CTGTTTAACC 
GTGGCCGATA TCTGCGCCAC CAACGAAAAA ACCTGGAATA ACTGGAAAGG CTCACTGCTG 
CGCGACTTAT ATTTTTCCAC CCAAAGGGTA CTTGCGCGCG GCAAAGAAAA GCCCGTCGAT 
ATTCGGGCCC GAGTGCGCGA ATACCAAGCC AAGGCAAAAA AAGAATTACT GCGGCGCGGC 
ATTAAAGAAA AAGATTTAGA TACCCTTTGG CAACGCTTTA AGGCCGACTA TTTTTTGCGC 
CACCAGCCCA ATCAAGTCGC TTGGCATGCT GAAGCTATCC TCAAGCATAA GCAGGTAGAT 
GAACCCTTAG TGCTCGTCTC AAAACACACG ACCCGCGGCG GTACGGAACT CTTTGTCTAC 
TGTCAGGACA GACCTAAGTT ATTTGCTACC GTGATGGCGG TGCTTGATAA TAAAAACATT 
AACGTCCACG ATGCTAACAT CATGACATCA AAGGACAATT ATGCTCTCGA TACCTTTGTT 
ATTCTCGAGC AAGACGGCGA GCCCGTCAGC CAACTCTCGC GCATACAAAG TATCCGTAAA 
GCCCTTGAAA AAGCGCTCGC CAGTGATAAC CCTAAACTGC CACGCTTTAG AAAACTGTCG 
CGCAAGATGA AACCTTTTAA TGTTCCTACT CAGGTGAGTT TCCTTGAGAG TAACCGTCAT 
GGTACAAGTA TGATGGAACT CATTGCCTTA GATACGCCGG GATTATTAGC TAAAGTGGGC 
GATATTTTCT ATCGCTGCAA CACGACTTTG CTCTCCGCCA AGATCACGAC CATCGGCGAG 
CGAGCGGAAG ACTTTTTTAT TTTGCAAACC AATGACGGCT TGCAACTCAA TGAAACCCAA 
GAGCATACGC TCAAGGAAGC CTTGATTAGC GCACTGAGCG CTATCAACAC AGAGTCAACC 
AATTAA 

 

Protein sequence

MNTALLAKQS LIEQNQTLLA RFKAKTPIEE LVTQRCQFVD SLVKQAWQQH GLDQYPIALI 
AVGGYGRGEL HPHSDVDLLF LFEGELSKAA ETTLSEFIAF LWDANLEIGH SVRTLDDTLR 
LGRDDITIAT NLLEARLLTG PETLFDQLYD AIRQSDFWTS SNFFIAKRDE QTARHAKASA 
FDLEPNIKSC PGGLRDIQTI AWVAMRHFGA SRLEELVEYE FLEPAELEEL LECQHFLWKL 
RFALHMAVGR DENRLLFDVQ RQVAELMGYE DATQLAVEQM MKRYYRTVRR VMELNEMLLQ 
LFKRATLGHT KALEIQAIDD NYQRRGAFIE ALSDDLFDSG EEIVRLFVHI AKNSNIKGIY 
APTLRSLRRA RRAQLQPLQE NPLCRQAFME ILKHPRGIAA LSLMHKHGVL SAYLPAWRNI 
EGQMQFDLFH AYTVDEHTHR LLLNIERFSQ PEQKEEFPLG SVLINQLPKK GLLVLGAIFH 
DIAKGRGGDH SKLGSSDALA FCKLHGLNDH DGRLVAWLVE NHLVMSVTAQ RRDISDPDVV 
ADFASKVRDA VHLSYLYCLT VADICATNEK TWNNWKGSLL RDLYFSTQRV LARGKEKPVD 
IRARVREYQA KAKKELLRRG IKEKDLDTLW QRFKADYFLR HQPNQVAWHA EAILKHKQVD 
EPLVLVSKHT TRGGTELFVY CQDRPKLFAT VMAVLDNKNI NVHDANIMTS KDNYALDTFV 
ILEQDGEPVS QLSRIQSIRK ALEKALASDN PKLPRFRKLS RKMKPFNVPT QVSFLESNRH 
GTSMMELIAL DTPGLLAKVG DIFYRCNTTL LSAKITTIGE RAEDFFILQT NDGLQLNETQ 
EHTLKEALIS ALSAINTEST N