| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1606 |
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| Symbol | |
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| ID | 1169402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1689454 |
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| End bp | 1691445 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343517 |
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| Product | metallo-beta-lactamase superfamily protein |
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| Protein accession | NP_717218 |
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| Protein GI | 24373175 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2015] Alkyl sulfatase and related hydrolases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAT CTTTAATGAC AATCAGTATT ATCGCCAGCT TCTCCTTAAG CGCAGTGGCC
GCTGAACACG AGCATGAGCA CATCAGCCTG CACTATCAAG GGAAGCCTGC CACCAAACAA
ACCATAGAGG TAAACAAAGC CACGGCAGCC ACCCTTAACT TTGCCGATAA AAAAGCCTTT
GAAGAGTTCT CTAAAAATCT TATTGCTGAG CTCGATGAAC CAACAGCGGC GATATTACGG
GCCGATTTCA GCTTTATTGG CGATAAAACC CCTGACACGG TCAACCCGTC ACTGTATCGC
CAAGCTCAGT TGAATATGGT GTCTAACGGC TTATACAAGG TCACCGATGG GATTTATCAA
GTGCGTGGCA CCGACTTAGC CAACTTAACC CTTATCCGCG GTAAAACGGG TTGGATCCTT
TATGACGTGC TGCTGACCAA AGAAGCGGCA AAATTATCCC TCGAATTTGC GCTTAAACAC
TTGCCCGAGG GCAATAACTT ACCCGTAGTC GCAATGATTT ATTCCCACAG TCATGGAGAT
CATTTTGGTG GCTCCCGCGC CATCAAAGAT ATGTTCCCAA ACGTCAAAGT CTATGGTTCC
AATAACATCA CCAAAGAAAT TGTTGACGAA AACGTACTCG CAGGAAATGC CATGAGCCGC
CGCGCCGCTT ATCAATATGG CGCAACGTTA GAGCGCAACG AGCAAGGCAT TGTCGATGCT
GCACTTGCCA AAGGCTTATC CAAAGGCGAA GTCACCTACG TTAAACCCGA TGTCACCTTA
AATGCCAAAG ACAAGTGGGA AACACTCACC ATTGATGGTA TCGACATGGT GTTTATGGAT
GCCTCAGGCA CAGAAGCCGC CTCGGAAATG GCCACCTATA TTCCCTCAAT GAAAGCATTG
TGGACCGCAG AGCTCACCTA CCACGGCATG CACAACATTT ATACCTTACG CGGGGCAAAA
GTTCGAGATG CGATAAAATG GTCTAAGGAT ATCAATGAAT TACTGAACCA TTTTGGTAAT
GATGCACAGG TTATATTCAC TGCCCACTCA GCACCCGTCT TTGGTAATGC AGATGTCAAT
GCCTACTTAA GAATGCAAAG GGATAACTAT GGCCTAGTCC ATAATCAAAC CCTGCGTTTA
GCCAATAATG GCGTAGGTAT TCAAGATATT GGCGATGCGA TTCAAACCAC TATCCCTAAG
ACCGTGCGCG ATACTTGGTA CACCAATGGT TACCACGGCA CCTACAGCCA TAATGCCAAA
GCCGTATACA ACATGTACCT TGGCTATTTC GATATGAATC CCGCCAACTT AAACCCACTA
CCGACAAAGG ATGAATCGGC CAAATTTGTT GAGTACATGG GCGGTGCTAA AGCCGTATTG
AAACACGCCA AAGCCGACTA TGCCCAAGGC GAATACCGTT TTGTGGCCAC CGCACTCAAT
AAAGTCGTGA TGGCAGAACC TAATAACACA GAGGCAAGAC AATTACTTGC CGATACCTAT
GAGCAACTGG GTTATCAAGC GGAGGGCGCT GGCTGGCGCA ATATTTATCT GACGGGTGCC
CAAGAGTTAC GAGCAGGAAT CCAGCCCGGC GCACCTAAAT CGGCCTCAGC AGATATTTTA
GGTGAAATGG ATATCTCGAC CCTGTTTGAC TTTCTCGCAG TAAGAGTTGA TAGCATCAAA
GCTGCAGAGC TTGGGCTATT AAGGCTTAAT GTGATCACCC CAGACACCAA AGAAACACTC
TATGTTGAGC TAAGCAATGG TAATTTAAGC AATATTCAAG TTGATAAACC GATGGAGGCA
GATACCAATC TTTATATTGA TAAACGTTAT ATTACCGGTA TTTTACTCGG TAAAACGACC
CTTAAAGATT TACTGGCTAA CGGCAGTGCG AAACTGGAAG GCGATAAAAC CGCTTTTGGT
AAAATCATGT CGACCTTAGT CCAGTTCGAT GCCAACTTTG AAATTGTCCC GCTACCACCA
ACAGCAAAAT AA
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| Protein sequence | MQKSLMTISI IASFSLSAVA AEHEHEHISL HYQGKPATKQ TIEVNKATAA TLNFADKKAF
EEFSKNLIAE LDEPTAAILR ADFSFIGDKT PDTVNPSLYR QAQLNMVSNG LYKVTDGIYQ
VRGTDLANLT LIRGKTGWIL YDVLLTKEAA KLSLEFALKH LPEGNNLPVV AMIYSHSHGD
HFGGSRAIKD MFPNVKVYGS NNITKEIVDE NVLAGNAMSR RAAYQYGATL ERNEQGIVDA
ALAKGLSKGE VTYVKPDVTL NAKDKWETLT IDGIDMVFMD ASGTEAASEM ATYIPSMKAL
WTAELTYHGM HNIYTLRGAK VRDAIKWSKD INELLNHFGN DAQVIFTAHS APVFGNADVN
AYLRMQRDNY GLVHNQTLRL ANNGVGIQDI GDAIQTTIPK TVRDTWYTNG YHGTYSHNAK
AVYNMYLGYF DMNPANLNPL PTKDESAKFV EYMGGAKAVL KHAKADYAQG EYRFVATALN
KVVMAEPNNT EARQLLADTY EQLGYQAEGA GWRNIYLTGA QELRAGIQPG APKSASADIL
GEMDISTLFD FLAVRVDSIK AAELGLLRLN VITPDTKETL YVELSNGNLS NIQVDKPMEA
DTNLYIDKRY ITGILLGKTT LKDLLANGSA KLEGDKTAFG KIMSTLVQFD ANFEIVPLPP
TAK
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