Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1585 |
Symbol | |
ID | 1169387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 1661674 |
End bp | 1662300 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637343503 |
Product | fumarylacetoacetate hydrolase family protein |
Protein accession | NP_717198 |
Protein GI | 24373155 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACAG TTATCGTCGG TGAGGAGCAG ATTTGCCCCA GCAAAATCCT CTGTATTGGG CGCAATTATG TGGACCATAT TCATGAACTC GGCAATGAAA TCCCCGATGA TATGGTGGTG TTTTTTAAGC CTAATTCGGC CATCAGTGCT CAATTACATT CCCTGCATCT CGGTGAGACG CTGCACTATG AAACCGAGCT GTGTTTTATC TACCAGCAGG GGCGTTTTAG CCATGTTGGC GTGGGGCTTG ATTTGACCAA GCGTGAACTG CAAAGCAAGC TTAAGGCAAA GGGATTACCG TGGGAAAAAG CCAAAGCCTT TGATGGTGCT GCGCTTTTTA GCCCTTTTGT TGCTATTGAT GACGCCAGTG CGCAATTTCA ATTTAGCTTA TGCATTGATG GGGTGTTAAC CCAAGAAGGC CATGTAGATT TAATGATCTA TCAGCCGCAG ACGATTTTGT CTGAGTTACA ACGCTTTACT ACTTTAGAAG ACGGCGACAT TGTGATGACA GGCACGCCTA AAGGGGTGGG GAGCATAGCG CCTAATAGCA TGTTTAAGGT GGCGTTACAC ATAAAAGATA CGGCCAAGCA AACGCCTTTG GTTGAGCATC AGTGGCTGAG CCTGTAA
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Protein sequence | MKTVIVGEEQ ICPSKILCIG RNYVDHIHEL GNEIPDDMVV FFKPNSAISA QLHSLHLGET LHYETELCFI YQQGRFSHVG VGLDLTKREL QSKLKAKGLP WEKAKAFDGA ALFSPFVAID DASAQFQFSL CIDGVLTQEG HVDLMIYQPQ TILSELQRFT TLEDGDIVMT GTPKGVGSIA PNSMFKVALH IKDTAKQTPL VEHQWLSL
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