| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1583 |
|---|
| Symbol | |
|---|
| ID | 1169386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 1660328 |
|---|
| End bp | 1661341 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637343502 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_717196 |
|---|
| Protein GI | 24373153 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAAA GACGCGAAGC ATTTGAGATT GAAGGCAAGC GAGTGATTGC AGGCTCGCAA
ATGGGGATTA AGTTGCCTGC TGCCAAGCTC TATACCGATA CCCAGCTTGA TATTCATGTC
GAAGTGTTTC ATGGCGTAAA ACCCGGCCCA ACGCTTCTGG TTTGTGCTGC CATTCATGGT
GATGAATTAA ATGGCATTGA GATCTGTAGG CGTTTACTTG GACGGGTTAA TCCTAAAAAT
TTGGCCGGTA CCTTGATTGT TGTGCCGATT GTGAATGTGT TTGGTTTTAT TCAACAATCC
CGATATTTGC CCGATAGGCG CGATCTCAAC CGCTGTTTTC CAGGTTCGAG CAAAGGCGCA
TTAGCGAGTC GTTTAGCCAA CCTTTTTGCG ACCCAATTAC TGGTCCATGC AACCCATGTG
ATTGATTTAC ACACGGGCGC CATTCATCGA GATAACTTGC CGCAAATTCG CTGTGATACT
AATGATGAGA CTATGCTCGC CATGGCGAAT GCCTTTGGTG CGCCGCTTAT CATGCATTCC
AAGGCGCGTA GCGTGTCGAT GCGCGGCTAT GCTAACCAGC AGGGCATTCC TTGTATTTTG
TATGAGGCGG GCGAGGCGCT GCGCTTTAGT GAGCTTGCAA TTAAGTCGGG TCTTAAGGGC
GTGCTCAATG TGATGCGTAG TCTTGGTATG CTTAAGGGCC GTGTCAGTAA TAAAATTGCC
AGTGTGAGTG CGATACGCAG CTATTGGATC CGCAGTGAGT CCGATGGCTT AGTCAATATG
AAGCTCAAAC TTGGTCAGCG GGTCAATAAG GGTTATATCA TCGCCCATAT TGTCAGTCCG
CATGGGGGCG ACAGTGTGGC GATCCGTGCG CCAACCGATG GCATTATCAT CGGGATCAGC
AATATACCGG TGACGAATGA AGGCGAGGGC ATGTTCCATA TTGCACAGTT TGAAGGCGAC
GAGATTGAAA TCGCTAACGA GCAACTCGAC GAGTTTTTAA TGGAATATGC CTAG
|
|---|
| Protein sequence | MVKRREAFEI EGKRVIAGSQ MGIKLPAAKL YTDTQLDIHV EVFHGVKPGP TLLVCAAIHG
DELNGIEICR RLLGRVNPKN LAGTLIVVPI VNVFGFIQQS RYLPDRRDLN RCFPGSSKGA
LASRLANLFA TQLLVHATHV IDLHTGAIHR DNLPQIRCDT NDETMLAMAN AFGAPLIMHS
KARSVSMRGY ANQQGIPCIL YEAGEALRFS ELAIKSGLKG VLNVMRSLGM LKGRVSNKIA
SVSAIRSYWI RSESDGLVNM KLKLGQRVNK GYIIAHIVSP HGGDSVAIRA PTDGIIIGIS
NIPVTNEGEG MFHIAQFEGD EIEIANEQLD EFLMEYA
|
|---|
| |