| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1571 |
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| Symbol | |
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| ID | 1169376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1647665 |
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| End bp | 1650790 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343492 |
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| Product | hypothetical protein |
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| Protein accession | NP_717184 |
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| Protein GI | 24373141 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC AACGCCCTGA TTTTATCTAT CCTCAAGGCA GCATGTTAAT GCACTCTCCC
TTAGTGTTGA ATAAAGCCGA TATGTACGGT TTTTTTCTCA AGGGGAAACT CGCAAATCTT
CAACGCTCAA TAGATAACAC ACTGAATCAA GTGGCCGGTA GCGCCATGTA CTTTAAAGTC
TTGTCGCCCT ATGTATTGAC CACCTTTACT CAGATCGAAA AAGCTTATTC AGACTACCCC
ACAGATAGAG CAAAGGGCTG GATCCAAGAA ACCGATATTA TCACTTGGGT TATGGTCGGC
CGTCAGGACA ATAGCAGCAG TACAAAAATC AGCCATGTGT ATTTTCAGCC GCTGCATATC
TGGGTAAACG ATGCGATGGC CTTAATCAAT GGCCGAGAGC TATTTGGTTA TCCTAAGTAT
TTGTGTGAAT ACACTATGCC CGCGGCCGGT CAGCCGTTAA CTCGCCTCTC CCTTGCCGCA
AAAAGCTTTT TACATTTTAG CCCTGACACA GAGCTTGCCA TGCATCCGCT GCTTGAGGTG
AATTGTAATG CGAAACCAGA GGCGCAGCTT TCAACCGTCG AAGCGATAAC CCAAACCTGG
AAACTCTTTA AGGAACAAAC AGATTTTATT CCAGAGCTTG ATAAACTCGG TGAAGAGCAA
CTCTTCCATC TACTGTTTAA GCCCGCTATC GATCAAGTAT TTTTAAAGCA GTTCCCAGAT
GCTTCAGGCC AAAAAGCCGT TTATCAGGCG ATTACCGCAT CGCCCGCTAA GGTTAATAAA
GTACACAGCG TTGCACTGCT GGAAAATGAC TTTGTCGCCA CCCTTTTTGA CAATGCCAGC
TTCCCGCTCA AAGACACTCT CGGGGTTGAA CTTGGCGAGC AACACGTGTT ACTGCCCTAT
CATGTGAACT TTGACTTTGA AGTGCCACCG GGCGAAGTGC TCGTGGATAA CTCTGAAATC
AAAAAACAGA AAATTGCCAT TCTCGGTGGC GGTGTCGCCG CCATGACCGC AGCTTGCTAC
CTCACAGATA AACCTGGTTG GCAAAATCAA TATGAGATTG ATATCTATCA ATTAGGTTGG
CGAATCGGTG GAAAAGGAGC AAGCGGTCGC AATGCAGCGA TGGGGCAACG TATTGAAGAA
CATGGTTTAC ATATCTGGTT CGGGTTTTAT CAAAATGCCT TCGCCTTGAT GCGTAAAGCC
TATGAAGAAT TAGATCGTCC CGCCCAAGCG CCACTAGCAA CCTTTTTAGA TGCCTTTAAG
CCCCATCACT TTATTGTGCT TCAGGAGGAA ATCAATGGTC GCTCCGTCAG TTGGCCTATC
ACTTTCCCAT CGCTCCCAGG GACCCCTGGG GATGGCACTG AAACCTTAAC CTTCTGGAAG
GTCGTTAAAG CCGCCTTTGC ATGGATAAAA GAGTGGCTTA AGGATATGGA CACCTTACTC
GAAGCCGATG AAAAGGCTAT GGAGACACCT AAAAACTGGC TCGATACTCG CTGGTTTGAG
CAACTTAAGG ATAAATTAGA AGATTCAGTT GAAGATGCCA TGGAATCCCT CGATGCCCTT
GGCGATAAAT TAGAATGCCA TTTTAATCAG ATGATTGGCC GTGAGTGTGA TGAGAATGTG
CATAGCGAGA GCGATGATGG ACTGGTCGAA TCCGCCGTCG ATGCCCTGCA CCAACGACTC
GTTAAACGCT TTACCGACCA TTTAGACACC AATGACGAAT TGCGCCATCT GTATATCGCC
GTTGACTTGG GGCTGACCAT ATTAAAAGGC ATGTTTGTCG ATAATGTGTT TGAAAAAGGC
TTCGATGCCA TCAATGACTA TGATTACCGC GAATGGCTAA CCAAACACGG CGCCAGCCAA
AAATACACTG TCGATAGTGC GCCTGTGCGC GGTTTCTATG ATCTTGTTTT TGCCTACGAG
AAAGGCAATT TTGATAAACC CAATGTCGAA GCGGGGACAA TTATTCGTTC AATGTTGCGC
ATCGCCCTTT GTTATCAAGG TGGGATCATG TGGAAAATGC AGGCCGGCAT GGGCGATGTG
GTCTTTACCC CCTACTATGA AGTGCTAAAA CGTCGCGGGG TCAACTTCCA CTTTTTCAAT
CGAGTCGACA ATCTAGAATG TCGTAACAAC AGTATTCAAG CGATTGAAAT CACAGAGCAA
ATCGCACTTA ATCCTTCGGT AGAGAACTAC AATCCTTTGG TGGATGTAAA GGGCTTAGCC
TGCTGGCCAA GCACACCTAA TTATGAGCAA CTTAATGCCG CCCAAGCGGC GCTGCTAAAA
GCCCATGATA TTAATCTCGA ACACTTTTGG AGCGATTGGG ACAATCTCTA CGAGGCACAA
TTTGGCCAAG CACTGCCGAA AAAACGTCTG GTCAAAGGAG TAGACTTCGA CAAAGTGATT
TTTGGCCTGT CAATCGGCTC GGTTCCTCAT GTGGCTAGTG AAGTCATGGC GCAGAGTCCG
GCACTAAAAA CCTGCGTAGA TAAAGTGCAG GCAGTAGCGA CCCAAGCCTA TCAACTGTGG
ATGGACCAAG ATCTTAACGG AATAGGTTGG CCAAATTATT CAGAAGATAG CGAGCAGCCA
GTTTTATCAG GATTTACCGA ACCCTTCGAT ACTTGGGCCT CTATGGATCA ATTACTCGAT
AAGGAAGACT GGCGTGGCAC TGAGCCTAAA AATGCCAGTT ATTTCTGCTC GGCTTTGCCC
GTTGATGTTT ATCCACCGCA CACAGATGTA GGCTTCCAGC AACGTAAAAC AGCCGAAGCC
AAGGCGGGAG CCATCCACCA ACTCAATACA GAAATTCATA AGCTATGGCA GCATGTTGGC
GACACCTTCC CGTGGGAATG GTTACATGAT GAACAAAACC GCCAAGGCGA GGCACGATTT
GATAGCCAAT ATTGGCGGGC GAACGTGGAC CCTTCCGAAC GTTATGTGTT ATCGGTCAAA
GGCAGTTCAC AATACCGGAT AACCACGGAT GGAACGGGGA TCGACAATTT GTACATGACG
GGCGACTGGA TTAAAACTGG CCTCAATGCC GGATGTGTTG AAGCCGCCAC GATGGCGGGG
ATGCATACCG CTAAAGCAAT TTGTGGCCAT CCAGCAGTGA TAAAAGGTGA AAAAGACTTC
GGCTAG
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| Protein sequence | MEKQRPDFIY PQGSMLMHSP LVLNKADMYG FFLKGKLANL QRSIDNTLNQ VAGSAMYFKV
LSPYVLTTFT QIEKAYSDYP TDRAKGWIQE TDIITWVMVG RQDNSSSTKI SHVYFQPLHI
WVNDAMALIN GRELFGYPKY LCEYTMPAAG QPLTRLSLAA KSFLHFSPDT ELAMHPLLEV
NCNAKPEAQL STVEAITQTW KLFKEQTDFI PELDKLGEEQ LFHLLFKPAI DQVFLKQFPD
ASGQKAVYQA ITASPAKVNK VHSVALLEND FVATLFDNAS FPLKDTLGVE LGEQHVLLPY
HVNFDFEVPP GEVLVDNSEI KKQKIAILGG GVAAMTAACY LTDKPGWQNQ YEIDIYQLGW
RIGGKGASGR NAAMGQRIEE HGLHIWFGFY QNAFALMRKA YEELDRPAQA PLATFLDAFK
PHHFIVLQEE INGRSVSWPI TFPSLPGTPG DGTETLTFWK VVKAAFAWIK EWLKDMDTLL
EADEKAMETP KNWLDTRWFE QLKDKLEDSV EDAMESLDAL GDKLECHFNQ MIGRECDENV
HSESDDGLVE SAVDALHQRL VKRFTDHLDT NDELRHLYIA VDLGLTILKG MFVDNVFEKG
FDAINDYDYR EWLTKHGASQ KYTVDSAPVR GFYDLVFAYE KGNFDKPNVE AGTIIRSMLR
IALCYQGGIM WKMQAGMGDV VFTPYYEVLK RRGVNFHFFN RVDNLECRNN SIQAIEITEQ
IALNPSVENY NPLVDVKGLA CWPSTPNYEQ LNAAQAALLK AHDINLEHFW SDWDNLYEAQ
FGQALPKKRL VKGVDFDKVI FGLSIGSVPH VASEVMAQSP ALKTCVDKVQ AVATQAYQLW
MDQDLNGIGW PNYSEDSEQP VLSGFTEPFD TWASMDQLLD KEDWRGTEPK NASYFCSALP
VDVYPPHTDV GFQQRKTAEA KAGAIHQLNT EIHKLWQHVG DTFPWEWLHD EQNRQGEARF
DSQYWRANVD PSERYVLSVK GSSQYRITTD GTGIDNLYMT GDWIKTGLNA GCVEAATMAG
MHTAKAICGH PAVIKGEKDF G
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