| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1561 |
|---|
| Symbol | |
|---|
| ID | 1169367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 1638276 |
|---|
| End bp | 1640072 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637343483 |
|---|
| Product | M1 family peptidase |
|---|
| Protein accession | NP_717174 |
|---|
| Protein GI | 24373131 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAATAG CACCCACAGC ATGGGATTTA ACTCGGGATT ATCATTCTTT TGCTAATACT
GACCAAGTGC AGGTAACCCA CCTTTCCTTA ACGCTTACGG TTGACTTTGA GGCTCGTACC
TTGCTTGGTG AGGCAGTGCT CTCTCTCAGG TATATAGAGT CGCAGGTTGC TGAATTATGG
CTAGATACCA GAGGTTTAGC TATTTTATCG GTAATGACCG AGGCTCAAGT TCCCCTTGAG
TTTTCACTCG AGGAGTCGAA TGAAATACTC GGCCAAAAAT TATCCATTCG TTTACCGCAG
TTACAATGTG AACGGGTGTG CATTCGTTAT CTCACATCAA TGCAGGCACA GGGATTACAG
TGGCTAGCGC CAGAGCAAAC GGCAGGTAAA CAGTTACCTT ATCTGTTTAG CCAATCGCAA
CCGATTAACG CCCGCAGCTG GATACCATTG CAGGATACGC CTAAGGTACG GATTACCTTC
GATGCTAAAG TTCAAGTACC TAAAGGAATG CGCGCTGTAA TGAGTGCGAT GAATCATCCT
GAGACGCCAC TAGAAGGGAC ATTTCAATTT GAGATGGAAA AGCCCATCCC CACACATTTA
TTGGCGTTAG CCGTTGGTGA TTTAGCATTT CAAGTCATTG GCCCACGTAG TGGCGTCTAT
ACCGAACCTT GTATGTTGGA AGCTGCGGCA ACTGAGTTTG CCGATACCGA ACATATGCTT
GATGTGGCGC AATCATTATT AGGCCCCTAT GCCTGGGGGC GCTACGATAT GATCATCTTG
CCTCCGAGTT TTCCCTTCGG TGGGATGGAA AATCCGCGTT TAGCTTTTTT AACCCCAACC
CTGATTGCGG GGGATAAGAG CCTAGTCTCA ACGGTTGCCC ATGAGCTGGC TCATTCATGG
ACAGGAAATT TAGTCAGTAA TGCCACGTGG CGAGATCTCT GGTTAAACGA AGGTTTTACG
ACCTATTTCA CCAATAGGAT TGTGGAACAA GTCTATGGCA GGGAACAGGC CGAACTGGAA
TGGGTGATTG AATTTGGTCG ACTACAAGAA GAAATCGCTG CCTTGCCACT TCATCGGCAA
ACCTTGCCCG CCAATGTGCA GCAGGCCGAT CCTAATTTGG CCTTTAATCG CTTTACCTAT
GATAAGGCGT CGATGTTCGT CCATGATTTA GAGCGTCGTC TGGGGCGAGC CGAGTTTGAT
AAGTTCCTGT TTACCTATGT GCAGCACTTC GCTTTTAAGG CGATTACTAC AGAAATGTTT
GTCAAATACG CAAAAGCGGC TTTAGTCGAA GCCTATCCGG ATAAGATAAG TGAAGCCGAA
CTGCTGGAGT GGATTTACGG TGAGGGGTTG CCTCAGGGAT ATGTGGGGCC GACATCGCGA
AGTTTAGATA AAGTCGATGA TGCCTTGAAC GATTTTTTAC AGGGTAAGGC TGCGGCTCTG
CTTAATGTAA AAAGCTGGCG TGTGCATCAT TGGCAATATT TTTTGACTCA ATTACCTGAA
GTGCTGTCGC AAGTACAATT AATGGATTTG GATGACAGTT TTAAATTGAC CGAATCGAAC
AATGCTGAAA TTGCCTGTGA CTGGTTTAGA GTTGCCATCC GTAATCATTA TGATCCCGTT
CTGCCAGCAC TCAGCCGCTA TTTGCAGCGT ATCGGCCGGG GCAAATTTGT CCGTCCGCTT
TACGCTGAAT TAAATATAGC TGGTTATCAT ACTGAGTTAC AAAGCATTTA TTCAAGCGCG
CGCTCGGGCT ATCACCCATC CATTCAAGTG CAGTTGGATA GAATGTTTAA GTCGTAA
|
|---|
| Protein sequence | MPIAPTAWDL TRDYHSFANT DQVQVTHLSL TLTVDFEART LLGEAVLSLR YIESQVAELW
LDTRGLAILS VMTEAQVPLE FSLEESNEIL GQKLSIRLPQ LQCERVCIRY LTSMQAQGLQ
WLAPEQTAGK QLPYLFSQSQ PINARSWIPL QDTPKVRITF DAKVQVPKGM RAVMSAMNHP
ETPLEGTFQF EMEKPIPTHL LALAVGDLAF QVIGPRSGVY TEPCMLEAAA TEFADTEHML
DVAQSLLGPY AWGRYDMIIL PPSFPFGGME NPRLAFLTPT LIAGDKSLVS TVAHELAHSW
TGNLVSNATW RDLWLNEGFT TYFTNRIVEQ VYGREQAELE WVIEFGRLQE EIAALPLHRQ
TLPANVQQAD PNLAFNRFTY DKASMFVHDL ERRLGRAEFD KFLFTYVQHF AFKAITTEMF
VKYAKAALVE AYPDKISEAE LLEWIYGEGL PQGYVGPTSR SLDKVDDALN DFLQGKAAAL
LNVKSWRVHH WQYFLTQLPE VLSQVQLMDL DDSFKLTESN NAEIACDWFR VAIRNHYDPV
LPALSRYLQR IGRGKFVRPL YAELNIAGYH TELQSIYSSA RSGYHPSIQV QLDRMFKS
|
|---|
| |