Gene SO_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1560 
Symbol 
ID1169366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp1636778 
End bp1637749 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content43% 
IMG OID637343482 
Productphosphate-binding protein 
Protein accessionNP_717173 
Protein GI24373130 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR02136] phosphate binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGA AAAAACTTGT CGGCGCGATG ACTCTCACAG CCGCTGGTGT ATTCTCTGCA 
ACTGCCATGG CAGCTATTGA CCCATCTCTA CCAACTTACG AGAAAACAAG TGGTGTGTCT 
GGCAACTTAT CATCTGTAGG TTCAGATACT TTAGCCAATA TGATGACACT TTGGGCTGAA 
GAATTTAAAC AGATGTATCC AAACGTCAAT ATCCAAATTC AAGCGGCCGG TTCTTCAACT 
GCGCCACCAG CGTTGACTGA AGGTACTTCA CAATTCGGCC CAATGAGCCG CAAGATGAAG 
CCTAACGAAG TAGAAGCGTT TGAAAAGCAT TATGGCTACA AGCCAACTGA AATTCGTGTT 
GCGATTGACG CTTTAGCAGT ATTCGTACAC AAAGATAACC CAATCAAAGG CTTAACGGCT 
GAACAAGTTG ACGGTATCTT CTCTTCTACC CATAAATGTG GTGGTGCGGA TATTCAACGT 
TGGGGTGATT TAGGTCTTAG TGGTGATTGG TCTGCAAAAG ACGTTCAATT ATATGGACGT 
AACTCAGTAT CAGGTACTTA CGGTTACTTC AAAGAGAAAG CGCTTTGTAA AGGCGACTTT 
AAGGCGAACG TAAACGAGCA ACCTGGTTCA GCATCAGTCG TTCAATCCGT ATCTCAATCT 
TTGAATGCGG TTGGTTACTC TGGTATCGGT TATAAAACTG CAGGCGTAAA AGCCGTTGCA 
ATCGCTAAAA AAGGTAATGA GTTTATCGAA GCGACTGCAG AAAACGCCGC TAATGGTACT 
TACCCATTAT CACGTTACTT GTATGTATAC GTGAACAAGC AACCAAACAA AGACTTAGCA 
CCAATGGAAA AAGAATTCAT CCGTTATGTG CTGTCTAAGC AAGGTCAGCA AGTTGTAGAA 
AAAGACGGTT ACGTGACGCT GCCTAAGAGC GTAGTTGCCA AAGATTTAGA ACAGTTGGGC 
ATTCGCCTCT AA
 
Protein sequence
MKLKKLVGAM TLTAAGVFSA TAMAAIDPSL PTYEKTSGVS GNLSSVGSDT LANMMTLWAE 
EFKQMYPNVN IQIQAAGSST APPALTEGTS QFGPMSRKMK PNEVEAFEKH YGYKPTEIRV 
AIDALAVFVH KDNPIKGLTA EQVDGIFSST HKCGGADIQR WGDLGLSGDW SAKDVQLYGR 
NSVSGTYGYF KEKALCKGDF KANVNEQPGS ASVVQSVSQS LNAVGYSGIG YKTAGVKAVA 
IAKKGNEFIE ATAENAANGT YPLSRYLYVY VNKQPNKDLA PMEKEFIRYV LSKQGQQVVE 
KDGYVTLPKS VVAKDLEQLG IRL