Gene SO_1552 details

Gene Information

• Locus tag: SO_1552
• ID: 1169358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 1627803
• End bp: 1629965
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637343475
• Product: TPR domain-containing protein
• Protein accession: NP_717166
• Protein GI: 24373123

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAGTC CCCAATTTCG CCAAGACCCA GTAAGCGTGC AGTTGAGCGT ACCCGAAAAC 
TGGCAGAGTT ATTCGGGCAT GTCATCGGGC CCAGTGGCAC ATTTCTTTAT CGCACCAAAT 
TATGATGTGT TGATTGATTC TCCCATTGAA ACAGGTACTA GCACCCATAA AAAGTTTACG 
GCCAATGGCA AAGACTATGA GCTGCTGTTT TGGGGCGAAG GTAACTACGA TGCGGATAAA 
GTGGTTAAAG ACTTAACTGC ATTGAGTGGG CAAGCCAAGG CGATTTGGGA TGAATATCCC 
TTTGAGCGCT ATGTGTAA 

 

Protein sequence

MHKFIVIFVT LLISISVQTL AADLEIEEIE LRETPQKMYD RLNQSISFPI SFKNREQFER 
AAQEQGYSPD EFEHILQLLA RLNLEPNVKT KVEFQDANSL IELLTSIAQT PLEQATVAML 
KGRYIGRTEQ KYQEAIAFYN QALSHINDSV DLGSMLLKHT IHEHLGLLHL VIRQDVPALM 
HFHTYRDIAY KLRNDYLIAA AESKLGHYYN KNQQLTKSLQ HYSEAVRLSN RSNYPSMKTH 
LQLQLAKVYR DLKQWDEALK NAHEAAAGFK KLGNDTYLSS CMTVIAMVYG EQGDWNRAID 
YYLNAQQLDA KRGNYIAQGL NFHNLGQAYS HLNDNVNALK YLLMANKIFT DKQSHHYLVY 
NELLIGEIAQ SKQDWTLMMS HAEHALALAS NLALLDEQKS ALTQIALSAE KMQDQAKVIS 
TQKRIIELNN TSKNTAKDPA VAASVLAEQQ LKLELNMVQG KLNDAIESAK ETNKLLALSG 
VILTLLVIAI IALLNQRQKS RRQNESLLQL TLEEPFTHHK GYAALLRDLG PNTPHTRTTA 
LALIEFRDHL MTDLNHGQYF ANAITCQLAS HISNSLFMPV YVIRQGLFAV RFTETVDPQQ 
ALTQLQQQLD KNAFTAIFNL GFINLPLLTK TEINIAPKLL FETVQMALAG ARSLPSNTCH 
YVSLRALDFV PPTLFADPLF LHLEKGIERG LIRVETNAMK EDIVWPCWEN NQNRHLLGNI