| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1551 |
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| Symbol | |
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| ID | 1169357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1626097 |
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| End bp | 1627653 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637343474 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | NP_717165 |
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| Protein GI | 24373122 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATT CCAACGCGAC CGTTACACAA CTGGCATTAC TTCAACAAAA GCTTCATTCG
GCAAAACTTG CACTTGATGA AGTCAATGAA GATAGGAACG CTAAGTTACA AACTTTACTC
CAATTTATTG GTCATTTAAG TCTTGCCTGT AAAGGTCAAA ACTTAGAATT GGATAATAAG
CTTGCCAAAC TTCGCCATAA CTTAAATACC TTTGATCGAG TCGATGAAGC CTTGCCGGAG
TTGGTCGATG TTGAACGCCT ATTAAAAGGT CAGTACCACC ATGTGATGGT ACAACTTGAA
GAAAGCCGTG CAGGGCTTGC GCAGGTTATC CGGCAAATTC AACGAGTTAA TTCTGTACCA
GAAAAACTCA AAAAAGAAAT TAACTACTTT AAACAGGACC TCGCCAAGCC GTTTCATACG
GTGTGGGAGT ACATTCCTAA AGTTAAACAA ATCATCGGCT TCTACGACAC CATCCTGCAA
CAACAGTTTA ATGGAACTGA AAAGTTAGAT GTGTTACCAA AGCACAGACA ACTCGCCCAT
GAGTTAGCAC AGATGATTTC GGAAATTGAG TTCCGTAAAG ATCAACGTGA TCAAGTGCTT
GTCATTAAAG AAATGCTAGC CTCTGATATC GAAATCGATA ATTTACTCGA GGCTTATCAA
ACCATTTTAT CCCTGCTGCT CGACAATATT GCACGGGAAA AATCGGCCTC ACAGGAATTT
CTCTACGCCT TAAACGATGC CTTAGCAGCA GTGCGGGAAG TCGTCAGCGA ATCCTATAAC
CATAACCAGC GTAGTTTCCA GCTTAAAACC CAGCTCAATC GTGAAATCAA TTCTCGTGTC
GATAATGTGG GCGAAGCCAT TATCGATACC GATGATATTG TCGACCTCAA AGCACGCTTA
ACTGAACAGC TCAATTCGAT TCGCTCCGCC CTCGCCCGCA AAGAAACCTT AGAGCAGCGC
GAGCAAGCCT TACTGCGTAA GTCTATGGAA ACCATGCGAA AAGAGCTTAA CGAGCTGAGT
AATGAGGCCA ATACCTACAA AGAGCGGCTT TTCGAGCAAC AAAAACTCAA TCTATTGGAC
AGCCTAACTC AATTACCTAA CCGTGCCGCC CTAGAAGAAC GCATGGAGCT TGAGTATCGC
AATTACCAGC GTCATAAATC TCCACTGTGG ATTGCGGTTG CAGATATCGA CCACTTTAAG
ATCATTAACG ACAGCTTTGG GCACAGTACA GGGGACAAAA CCCTCCAAGT TATCGCCATG
GCATTAAAGA ATTCCCTGCG GGATACCGAG TTTGTCGCCC GCTACGGCGG CGAAGAGTTT
GTGCTCATTT TGCCAGATAT TGATGATAGC GATATCGCTC AACTTTTAAA CAGAGTCCGT
GAAAAAGTAA AAAATATTCC ATTTAAATTT AAAAATCAGC GAATTACAGT TACAGTATCT
ATAGGGGCTG CGCGAGTGAT GGGCAATGAG CTCATTCATG AAACCTTTGA ACGCGCCGAT
GCAGCACTCT ACAAAGCAAA ACATGAAAGC AGAGACAGGG TCGTGATTGA CGTATAA
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| Protein sequence | MKDSNATVTQ LALLQQKLHS AKLALDEVNE DRNAKLQTLL QFIGHLSLAC KGQNLELDNK
LAKLRHNLNT FDRVDEALPE LVDVERLLKG QYHHVMVQLE ESRAGLAQVI RQIQRVNSVP
EKLKKEINYF KQDLAKPFHT VWEYIPKVKQ IIGFYDTILQ QQFNGTEKLD VLPKHRQLAH
ELAQMISEIE FRKDQRDQVL VIKEMLASDI EIDNLLEAYQ TILSLLLDNI AREKSASQEF
LYALNDALAA VREVVSESYN HNQRSFQLKT QLNREINSRV DNVGEAIIDT DDIVDLKARL
TEQLNSIRSA LARKETLEQR EQALLRKSME TMRKELNELS NEANTYKERL FEQQKLNLLD
SLTQLPNRAA LEERMELEYR NYQRHKSPLW IAVADIDHFK IINDSFGHST GDKTLQVIAM
ALKNSLRDTE FVARYGGEEF VLILPDIDDS DIAQLLNRVR EKVKNIPFKF KNQRITVTVS
IGAARVMGNE LIHETFERAD AALYKAKHES RDRVVIDV
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