Gene SO_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1546 
Symbol 
ID1169352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1620393 
End bp1621373 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content46% 
IMG OID637343469 
Producthypothetical protein 
Protein accessionNP_717160 
Protein GI24373117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGCC CTCGTAGAAC CCAGATAAGT CTTGAAGACA CGCCCTATTA CCATTGCTGT 
AGTCGCGTGG TGCGCCGTGC ATTTTTATGT GGTGATGATA CCTATTCGGG TAAAAACTAT
GACCATCGCC GCGCTTGGAT AGAATCGCTA CTGTTTGAAC TTGAAGCAGT TTTTGCTATT
GATGTGGCCG CGTTTGCGGT GATGTCGAAT CATCTGCATG TGGTGCTACG GATCGATATC
GATAGTGCCA ATCGTTGGAC TGACCGCGAA GTACTTGAGC AATGGCATAA GTTGTTTAAA
GGCGATGAAT TAACGCAAAA ATTCGTTAAA GATGAGTTAG TTCAAGCCCA TGAGGTCAAC
CGATTAAAGC ATTCAATTGC CCTTTATCGC AGTCGATTAT GCGACATTAG CTGGTTTATG
CGCTGCCTCA ATGAACCTAT CGCAAGGCAA GCAAATCAAG AAGATAACTG CACAGGTCGT
TTCTGGGAAG GTCGATTCAA ATCCCAAGCC CTACTCGATG AAGCCGCTGT GTTAGCCTGT
ATGACTTATG TTGATTTGAA TCCGATTAGA GCGCAACTCG CTGATTCACC AGAACAATCC
GACCATACCA GTATTCAGCT ACGTATTCGG GCCGCATTAA AAGGTGAGCA GCCCAGCAAT
CTCCTGCCTT TTATCGGTAA CGAGTGCGAC AACCAACCCA ATGGCATTGC GTTTGCCTTT
ACGGATTACC TTCAATTGGT GGAAGATACC GGTCGAATCA TTCGCAATGA TAAACGTGGA
TACATCAGTG AAAATAGCGG TAAGTTACTG ACAAGATTAA ATATCCCCCA TGACAATTGG
CTCAAGCTGA CCACCGAGTT TGGCAAACTA TTTCATGGCC CCGTGGGAAC CTTGCAAGAA
CTGACTGATT ACTGCGAACA TCTTGAAAAG CGACGACGGC ACTTTGCGGC AAGCTGCCAG
CACTTTCATA GCAACAGATA G
 
Protein sequence
MPRPRRTQIS LEDTPYYHCC SRVVRRAFLC GDDTYSGKNY DHRRAWIESL LFELEAVFAI 
DVAAFAVMSN HLHVVLRIDI DSANRWTDRE VLEQWHKLFK GDELTQKFVK DELVQAHEVN
RLKHSIALYR SRLCDISWFM RCLNEPIARQ ANQEDNCTGR FWEGRFKSQA LLDEAAVLAC
MTYVDLNPIR AQLADSPEQS DHTSIQLRIR AALKGEQPSN LLPFIGNECD NQPNGIAFAF
TDYLQLVEDT GRIIRNDKRG YISENSGKLL TRLNIPHDNW LKLTTEFGKL FHGPVGTLQE
LTDYCEHLEK RRRHFAASCQ HFHSNR