Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1546 |
Symbol | |
ID | 1169352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1620393 |
End bp | 1621373 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637343469 |
Product | hypothetical protein |
Protein accession | NP_717160 |
Protein GI | 24373117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCGCC CTCGTAGAAC CCAGATAAGT CTTGAAGACA CGCCCTATTA CCATTGCTGT AGTCGCGTGG TGCGCCGTGC ATTTTTATGT GGTGATGATA CCTATTCGGG TAAAAACTAT GACCATCGCC GCGCTTGGAT AGAATCGCTA CTGTTTGAAC TTGAAGCAGT TTTTGCTATT GATGTGGCCG CGTTTGCGGT GATGTCGAAT CATCTGCATG TGGTGCTACG GATCGATATC GATAGTGCCA ATCGTTGGAC TGACCGCGAA GTACTTGAGC AATGGCATAA GTTGTTTAAA GGCGATGAAT TAACGCAAAA ATTCGTTAAA GATGAGTTAG TTCAAGCCCA TGAGGTCAAC CGATTAAAGC ATTCAATTGC CCTTTATCGC AGTCGATTAT GCGACATTAG CTGGTTTATG CGCTGCCTCA ATGAACCTAT CGCAAGGCAA GCAAATCAAG AAGATAACTG CACAGGTCGT TTCTGGGAAG GTCGATTCAA ATCCCAAGCC CTACTCGATG AAGCCGCTGT GTTAGCCTGT ATGACTTATG TTGATTTGAA TCCGATTAGA GCGCAACTCG CTGATTCACC AGAACAATCC GACCATACCA GTATTCAGCT ACGTATTCGG GCCGCATTAA AAGGTGAGCA GCCCAGCAAT CTCCTGCCTT TTATCGGTAA CGAGTGCGAC AACCAACCCA ATGGCATTGC GTTTGCCTTT ACGGATTACC TTCAATTGGT GGAAGATACC GGTCGAATCA TTCGCAATGA TAAACGTGGA TACATCAGTG AAAATAGCGG TAAGTTACTG ACAAGATTAA ATATCCCCCA TGACAATTGG CTCAAGCTGA CCACCGAGTT TGGCAAACTA TTTCATGGCC CCGTGGGAAC CTTGCAAGAA CTGACTGATT ACTGCGAACA TCTTGAAAAG CGACGACGGC ACTTTGCGGC AAGCTGCCAG CACTTTCATA GCAACAGATA G
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Protein sequence | MPRPRRTQIS LEDTPYYHCC SRVVRRAFLC GDDTYSGKNY DHRRAWIESL LFELEAVFAI DVAAFAVMSN HLHVVLRIDI DSANRWTDRE VLEQWHKLFK GDELTQKFVK DELVQAHEVN RLKHSIALYR SRLCDISWFM RCLNEPIARQ ANQEDNCTGR FWEGRFKSQA LLDEAAVLAC MTYVDLNPIR AQLADSPEQS DHTSIQLRIR AALKGEQPSN LLPFIGNECD NQPNGIAFAF TDYLQLVEDT GRIIRNDKRG YISENSGKLL TRLNIPHDNW LKLTTEFGKL FHGPVGTLQE LTDYCEHLEK RRRHFAASCQ HFHSNR
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