Gene SO_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1518 
Symbol 
ID1169327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1591198 
End bp1591767 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content51% 
IMG OID637343447 
Producthypothetical protein 
Protein accessionNP_717135 
Protein GI24373092 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGTA AGCACGAAAT TCTCAATGCG CTCAAACTGT CGGCTTTAAC AAACCATCCT 
ATGCCAAGCA TCGATGTCGC CCCGAGGGTT GAAGATCTGG TTGGCCAGTT TGAAACCAAT 
CTTAAAACCG TGGCGGGCAC ACTGCACCGC GAAGGCGGCC TTGCGGCACT GCAAGCCAAA 
GTGGATGAGC TGATTGCCCA AGGCTTACAA GTTATCTCCC TCGTTGAGGG CGTCACGGCA 
AACCGTGATG TGCCACCAAC GGCTCACGAG CTCAGGGATA TCGATTATGC GGTTATTCCT 
GGGGATGTAG GTGTTGCCGA AAATGGTGCC ATTTGGGTAA ACAATAAGAA TCTCGGCCAC 
AGAGTGACAC CTTTTATCTG TGAAAACCTG ATCTTAGCCT TACCCATCCA TAAAATTGTG 
CCAAATATGC ATCAGGCCGC GAAAGAAGTG ACCTTAGATG CAGGCGAGTT TGGCGTGTTT 
ATCGCAGGCC CTTCAAAAAC CGCCGATATC GAGCAAGCCC TCGTCGTCGG CGCCCACGGT 
GCCTGCAGCT TAAATGTGTA TCTGGTTTAA
 
Protein sequence
MSSKHEILNA LKLSALTNHP MPSIDVAPRV EDLVGQFETN LKTVAGTLHR EGGLAALQAK 
VDELIAQGLQ VISLVEGVTA NRDVPPTAHE LRDIDYAVIP GDVGVAENGA IWVNNKNLGH 
RVTPFICENL ILALPIHKIV PNMHQAAKEV TLDAGEFGVF IAGPSKTADI EQALVVGAHG 
ACSLNVYLV