| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1505 |
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| Symbol | |
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| ID | 1169315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1578179 |
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| End bp | 1579723 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343435 |
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| Product | transporter, putative |
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| Protein accession | NP_717122 |
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| Protein GI | 24373079 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCACA ATAGTCCAAA TGCAGAGAAT GATCTGCGCG AAGTCAAGCA GTTAGGCATG
TGGGCCTCCA TCACTAGCCT AAGTTATATT TTTTGGTTAG TGGGCGGCAT GGAGCTGGTC
GAACGGATTG CTTATTACGG CGTTAAAGCC AGTGCGGGCC TATACGCAAA AGCGCCTGAA
TCGGCGGGTG GTTTGGGTAT TAGTCTGAGT GACTATGGCA TCATTATTTC TCTTTGGGCC
ATTATGCAGA CCTTTGTGCC CGTTTTTACC GGTGGGATAT CCGATAGGGT CGGCTATAAG
GAAACCATTT TTGGCTCCAC CATCATTAAA ATCATGGGCT ATTTGACCAT GGCATTTTTC
CCCACCTTTT GGGGCTTTTT ATCGGGTTCA TTACTACTCG CCATCGGTAC TGGGATATTT
AAACCCGGCA TCCAAGGCAC TTTAGTGCTC TCCACCAACC GCAATAACAC CTCGATGGCC
TGGGGGATTT TTTACCAAGT GGTGAATATC GGTGGCTTTT TGGGCCCATT GGTTGCCGTG
CATATGCGCC AGCTTTCTTG GGATAATGTG TTTTATGCTT GCGCCGCGAT TATCTCGCTA
AACTTCCTGT TTTTATTAAC CTATACCGAA CCGGGTAAAG CCGAACGCCT CGCCCGTAAT
CAACAAATTA AATCCGGTGA CATAAAGCAA GAAACCCTGT GGCGCGATGC TTGGCATGAG
CTGAAAAAGC CGATTGTGAT TTATTACATG CTGGTGTTTT CAGGCTTTTG GTTTTTGTTC
AATTCCCTGT TTGATGTGTT GCCCATCCAT ATTTCTGAAT GGGTCGACAC CAGTGTGATT
GTCACCAGCC TGTTTGGTAG CGAAGGCACT AGCAACGGTA TTTTACAATT CTGGCTCGGG
TTAAATAATG AAGGTACTAA GGTCATGCCC GAAGGCATGC TTAACCTCAA CGCCGGCCTA
ATTATGACCA GCTGCTTTTT AGTTGCCGCT CTGACCGCCA AATATCGTAT TACTACCGTC
ATGTTAATTG GCTGCTTACT TAGTATTTTA GCCTTTGTGT TTATCGGCGC CTTCCATGCT
GCTTGGTTTA TTGTGTTCGC CATTGCCATG TTCTCTATTG GCGAGATGAT GATTAGCCCG
AAGAAAAACG AGTTTATGGG CAACATTGCC CCCGAAGGTA AAAAAGCCAT GTACCTTGGC
TTTGTAATGC TTCCTCAAGG GATTGGTTGG GGCCTAGAAG GCTATTTTGG CCCTAAGCTC
TATGAAATTT ACGCATCAAA AGAGCTGTTT TCACGCGACT TATTACTTGA GCGCGGCATG
AGCCCTACAG ATGTAAGCGC CATTCCGCAG GGGGAAGCTT TTACCACTCT AGTGAGCTTT
ACTGGCGAAA ATGCCCATGA CCTCACTCAA CTCCTGTACA ACAGCCATAA TATCGGTATG
GCTTGGTATA TTATTGCGGC GATTGGTACC ATTTCAGCGG TGGGTATTTA TTTCTATGGT
AAGTGGTTAC TGACGCTGCA AAGAGCGCAG CAAGCAGCAC ACTAA
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| Protein sequence | MSHNSPNAEN DLREVKQLGM WASITSLSYI FWLVGGMELV ERIAYYGVKA SAGLYAKAPE
SAGGLGISLS DYGIIISLWA IMQTFVPVFT GGISDRVGYK ETIFGSTIIK IMGYLTMAFF
PTFWGFLSGS LLLAIGTGIF KPGIQGTLVL STNRNNTSMA WGIFYQVVNI GGFLGPLVAV
HMRQLSWDNV FYACAAIISL NFLFLLTYTE PGKAERLARN QQIKSGDIKQ ETLWRDAWHE
LKKPIVIYYM LVFSGFWFLF NSLFDVLPIH ISEWVDTSVI VTSLFGSEGT SNGILQFWLG
LNNEGTKVMP EGMLNLNAGL IMTSCFLVAA LTAKYRITTV MLIGCLLSIL AFVFIGAFHA
AWFIVFAIAM FSIGEMMISP KKNEFMGNIA PEGKKAMYLG FVMLPQGIGW GLEGYFGPKL
YEIYASKELF SRDLLLERGM SPTDVSAIPQ GEAFTTLVSF TGENAHDLTQ LLYNSHNIGM
AWYIIAAIGT ISAVGIYFYG KWLLTLQRAQ QAAH
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