| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1501 |
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| Symbol | |
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| ID | 1169311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1573651 |
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| End bp | 1575021 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637343431 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_717118 |
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| Protein GI | 24373075 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTG ACACACTCGG CTTATCTTCA CCTCTTTTGA ATGCGATAAC TGAGTGTGGC
TATCAGCAGC TCACTCAAGT GCAACAACAG GTTATTCCCC TCGCGTTAGT GGGTAAGGAT
ATTATGGCCT GTGCTCAAAC GGGAACCGGT AAAACCGCTG CCTTTGCTTT ACCCGTGCTA
GAGCAATTAG CTGCCAAGCC TGCCGATAAA CCGTTGCTGC GTGCCTTAGT GATGACGCCA
ACCCGAGAAT TAGCGATTCA AGTTTGTGCG AATATTCAAA AATATAGCCA ATTTTTGCCC
CTCAAAACCT TAGCGGTTTA TGGCGGTGCG AATATGAATC CCCAGCGCAA AGGGGTCGAG
CAGGGCGTGG ATATCCTCGT CGCCACTCCA GGGAGACTAT TTGATATTAT TGGCCAGTTC
AATTTAGATC TGTCCAGTGT AACCACCTTA GTGATTGACG AAGCGGATCG TATGCTCGAT
TTAGGCTTTG TACGCGACAT TGAAAAGGTG AAGCGCCTTA TCGCGCCAGT ACATCAAACC
ATGCTGTTTT CTGCTACCTA TAGCGATGCG GTGAAGCAGC TCTCCCATAA GATGCTTAAT
CAACCCCAGT GGGTTAATGT TGCAGAAAAT ACCACGGCAT CGACTGTAGA ACAGTTAGTG
TATCGGGTCG ATAAACGTCG CAAAGCAGAG TTATTATCTG AGCTGGTGGG GCGTAATAAT
TGGCGCCAAG TGTTGGTGTT CGCCAGTACT AAGGAATGCG CTGAGCATTT ATTGCAGGAG
TTAACGCTCG ACGGCATTAG CGCAGGCGTC TTCCATGGGG ATAAAACTCA AGGGGCTCGT
AATCGTGTGC TCGATGATTT TAAAGCTGGA AAACTGCGCG TGTTGGTGGC GACCGATGTT
GCTGCCCGCG GGCTTGATAT TCAGGCGCTG CCCTTAGTGA TAAACCTAGA GTTGCCTTTT
TTGGCGGAAG ATTATGTCCA TCGTATTGGC CGTACCGGCC GAGCAGGACT GTCAGGTCGA
GCCATTTCAT TTGTCAGTCC CGCGGATGAT GAAATGCTCG CTGAGATTGA AGCTTTAATT
GGCGAAAAAC TCCCCGTCAC CGTCCAGCCA GGTTACGAAG AAGGCACACC ACTTCCGGCG
CGTTACCGCG ATCTGCCCGT GGTAACCACC AAGACAAAAT GGAGCTATAA AGCGCCAAAG
GATCGCACTA TTGGCAAATC AAGTGCTGGT GGAAAGTCGA GTGAGAGCCA AGCCCGAGCG
AGAAAATCCC CTTCCCGTGA AGGTAAATAT TCAAAAGATA AAGCTAAAGT TAGTCCATCT
CAGCCTCAGC GTTCTGGTGG CAAGCCCCAT AGCGGCCACA AACTAAAGTA G
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| Protein sequence | MKFDTLGLSS PLLNAITECG YQQLTQVQQQ VIPLALVGKD IMACAQTGTG KTAAFALPVL
EQLAAKPADK PLLRALVMTP TRELAIQVCA NIQKYSQFLP LKTLAVYGGA NMNPQRKGVE
QGVDILVATP GRLFDIIGQF NLDLSSVTTL VIDEADRMLD LGFVRDIEKV KRLIAPVHQT
MLFSATYSDA VKQLSHKMLN QPQWVNVAEN TTASTVEQLV YRVDKRRKAE LLSELVGRNN
WRQVLVFAST KECAEHLLQE LTLDGISAGV FHGDKTQGAR NRVLDDFKAG KLRVLVATDV
AARGLDIQAL PLVINLELPF LAEDYVHRIG RTGRAGLSGR AISFVSPADD EMLAEIEALI
GEKLPVTVQP GYEEGTPLPA RYRDLPVVTT KTKWSYKAPK DRTIGKSSAG GKSSESQARA
RKSPSREGKY SKDKAKVSPS QPQRSGGKPH SGHKLK
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