| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1483 |
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| Symbol | aceB |
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| ID | 1169296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 1549276 |
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| End bp | 1550925 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637343416 |
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| Product | malate synthase |
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| Protein accession | NP_717100 |
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| Protein GI | 24373057 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAAC ACACTTTAAG TGAGCAACAA GTAAATTTGA CGCTGAATAA AGCCACTGCG
AATGGCACTC TGGCTCTGGT GGGAAATACC ATTCCTGGGC AAGAGGTGAT TTTTACCGAA
GGTGCAATGG CGTTGCTTGA ATCACTTTGT CGTGAATTTG GGGCTGAAGT GCCAACCTTA
CTCGCCAAGC GTAAAGATAG ACAAGCGCGT ATCGATAAAG GTGCTTTACC TGACTTTTTA
CCTGAAACTC GTGCGATTCG TGATGGCGCT TGGAAGATCC GCGGTATCCC GAATGACCTG
CTTGATCGCC GCGTTGAAAT TACCGGCCCC GTTGAACGTA AGATGGTAAT CAATGCGCTC
AATGCCAATG CCAAAGTGTT TATGGCTGAT TTTGAAGACT CTTTGGCACC AAGCTGGCAA
AAAGTGGTTG AAGGCCAAAT TAACCTGCGT GATGCAGTAC GCGGAGAGAT TGAATACACG
GCCCCAGAAA CCGGTAAGCA CTATAAGTTA GGCCCTAATC CTGCGGTATT GATCTGCCGT
GTACGTGGCC TGCATTTAAA AGAGAAGCAC GTTGAATTTA ACCAGCAGTC TATCCCTGGA
GGTTTGTTCG ATTTTGCGAT GTACTTTTAC CATAACTATC GTCAATTGCT GGCGAAGGGC
AGTGGTCCTT ACTTCTATAT TCCAAAACTT GAGAGTCATA TCGAGGCGCG CTGGTGGGCA
AAAGTGTTTG CTTTTGTTGA GGAAAGATTC TGTCTTCAAG CGGGTACTAT CAAATGTACT
TGCTTGATTG AGACGCTGCC TGCGGTGTTT GAAATGGATG AAATTCTTTA TGAGTTGCGC
TCCAACATTG TCGCACTCAA CTGTGGCCGT TGGGATTATA TCTTCAGCTA TATCAAAACG
TTAAAACGTC ATGGCGATCG TGTGTTACCG GACCGCCAAG CGGTGACTAT GGATACGCCT
TTTTTAAGTG CTTACTCCAG ACTGTTGATC AAAACCTGCC ATAAACGTGG CGCGTTAGCG
ATGGGCGGCA TGGCTGCCTT TATTCCAGCA AAAGATCCTG CGCAGAACGA AGCTGTGTTG
CAGCGGGTTC GAAAGGATAA AGAGCTCGAA GCCCGTAATG GCCACGATGG TACTTGGGTT
GCGCATCCCG GTCTGGCGGA TACGGCCATG GGGATTTTTA ACGAGTATAT CGGCCAAGAC
CATCAAAACC AATTACACAT TACCCGCGAT GTAGACGCTC CGATTTTAGC CGCTGAGTTA
TTAAAAACCT GCGATGGCGA GCGCACCGAG CAAGGCATGC GCCTAAATAT TCGCATCGCG
CTGCAATATC TGGAGGCATG GATCAGTGGC AACGGTTGTG TGCCGATTTA CGGATTAATG
GAAGATGCGG CAACCGCTGA AATCTCCCGC GCCTCGATTT GGCAATGGAT CCAACATGGT
AAGTCACTCT CCAATGGCAA ACTTGTTACT AAACAATTGT TTAAAGACAT GCTGGTAGAA
GAGTTGGCTA ATGTGAAAAA AGAAGTGGGC AGCGACAGAT TTACCCACGG CAAATTTACC
CAAGCAGCGG TATTGCTTGA GGATATTACC ACTTCTGATG AGTTGGTCGA CTTCTTAACC
TTACCCGGTT ACGAGATGCT AACTGCTTAA
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| Protein sequence | MTEHTLSEQQ VNLTLNKATA NGTLALVGNT IPGQEVIFTE GAMALLESLC REFGAEVPTL
LAKRKDRQAR IDKGALPDFL PETRAIRDGA WKIRGIPNDL LDRRVEITGP VERKMVINAL
NANAKVFMAD FEDSLAPSWQ KVVEGQINLR DAVRGEIEYT APETGKHYKL GPNPAVLICR
VRGLHLKEKH VEFNQQSIPG GLFDFAMYFY HNYRQLLAKG SGPYFYIPKL ESHIEARWWA
KVFAFVEERF CLQAGTIKCT CLIETLPAVF EMDEILYELR SNIVALNCGR WDYIFSYIKT
LKRHGDRVLP DRQAVTMDTP FLSAYSRLLI KTCHKRGALA MGGMAAFIPA KDPAQNEAVL
QRVRKDKELE ARNGHDGTWV AHPGLADTAM GIFNEYIGQD HQNQLHITRD VDAPILAAEL
LKTCDGERTE QGMRLNIRIA LQYLEAWISG NGCVPIYGLM EDAATAEISR ASIWQWIQHG
KSLSNGKLVT KQLFKDMLVE ELANVKKEVG SDRFTHGKFT QAAVLLEDIT TSDELVDFLT
LPGYEMLTA
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