Gene SO_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1481 
Symbol 
ID1169294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1544160 
End bp1545929 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content50% 
IMG OID637343414 
Productglutathione-regulated potassium-efflux system protein 
Protein accessionNP_717098 
Protein GI24373055 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGT CGAGCCTGCT CACTTCTGTA CTGTTGTTTT TATTGGCCGC GGTAATTTTT 
GTGCCCTTGG GCAAACGTTT TGGCGCAGGA CCGATTCTGT CTTATCTCGC TGCTGGGGTG
ATTTTAGGCC CAGGAGGTAT GGCATTGGTA TCCGATCCTG CGGCCGTGCT GCATTTTGCC
GAGCTTGGCG TGGTACTCAT GTTGTTTGTA CTTGGGCTTG AGCTTAATCC GAGCAAACTG
TGGGAACTGC GCAGCGCTAT CTTTGGTCTC GGTAGTGGTC AGTTACTCCT TTCTTGGGCG
GCAATTGGTG GCTTAGCTTG GGGTTTTGGC TTATCTATTG AGGCGGCACT TGTTGTGGGG
GCGGCATTAT CGCTGTCATC AACCGCTTTT GCAGTGCAGT TGATGAGTGA ACATCGACTG
CTAACAACGC CTCTTGGCCG CGATGCCTTT GGGGTATTGT TGATGCAAGA TCTCGCGGTG
ATCCCCATGT TGCTGTTAAC CGCTTACCTT GCGCCCAATT CGGCCCAGAT TGAACACCAT
GCAGTGCCTT GGTATTGGAC CTGTGTGGCT TTAATCGGTT TTGTGTTGGT GGGCAAATAT
CTGTTACCGC GGGTACTTAA ACTTGTCGCC AGCAGTGGCG TTCGTGAGGT GTTAACTGCC
TTTGCGCTAT TGTTGGTGAT GGGCAGTGCC CAATTGATGG AGTGGCTGGG GTTGTCTGCG
GGGATGGGCG CATTTTTAGC AGGGATTATG CTGGCGAACT CCAGCTACCG GCATCAGCTC
GAAACCGATA TAGAGCCTTT TAAGGGCTTA CTGCTTGGGC TGTTTTTTAT GGCCGTGGGC
ATGAGTATGG ATCTCAAACT GTTTTTGACC GATCCCTTAC TCATCCTTGC GATTTTGCTG
GGTATGTTAC TGATTAAGAC CCTAGTGCTG ATGCTGCTTG GCCGAGTGCG CCACCATACA
TGGCGCCCGA GTATTGCACT TGGGCTTATC TTGGCCGAGG GCGGTGAGTT TGCCTTTGTG
CTGTTATCGC AGGCGCAATT ATCCAGCATA GTGGATGATA AGATTGCCCA AATCTTAGTG
CTCGCCATTG GTTTATCCAT GGCGGTGACG CCGATGATTT TCACACTATT TAGAGCCACT
AAGCCTAAGG TGGTGGATAC GCGCTTGCCC GACACCATCA ATGTCACTGA GTCTGAGGTA
GTGATTGCCG GATTTGGTCG GGTAGGGCAG ATCACGGGAC GGATTTTAGC CTCCTCTGGT
ATTCCATTTG TGGCGTTAGA TAAGGATGCC AGCCATGTGG ATGTGATCCG TCAATATGGT
GGTGAGGTCT ATTTTGGCGA TGCTAGACGT TTAGATATGT TGATGTCGGC GGGGATTGCG
CGCTCGCGGT TATTATTACT GGCTGTTGAT AGTGTTGAAG ATTCGATTGA AATTGCCCAG
CAGGTAAAAA CCCATTTTCC CCATATTAAT ATCATTGCGC GGGCGCGGGA TCGTAACCAT
GCTTACCGAT TAATGAGTCT TGGGGTGACT GATGTGTTCC GCGAAACCTT TGGTTCGGCC
TTATCAGCCA GTGAGAAGAT ATTACAGGGC TTAGGTTTAT CCCAAGTGCA GGCCAATGAA
CGGGTGAAGA TTTTTGCTGA GCACGATAAA AAGCTGGTGA TAGCCAGTGC CGCTCATCAA
AATGATTTGG CAAAACTTAT TGATTTATCA AATAAAGGTA AAGCTGAGTT GGAGTCTTTG
ATGCGTGGCG ACAGGGAGAA TGTGAGTTAA
 
Protein sequence
MEESSLLTSV LLFLLAAVIF VPLGKRFGAG PILSYLAAGV ILGPGGMALV SDPAAVLHFA 
ELGVVLMLFV LGLELNPSKL WELRSAIFGL GSGQLLLSWA AIGGLAWGFG LSIEAALVVG
AALSLSSTAF AVQLMSEHRL LTTPLGRDAF GVLLMQDLAV IPMLLLTAYL APNSAQIEHH
AVPWYWTCVA LIGFVLVGKY LLPRVLKLVA SSGVREVLTA FALLLVMGSA QLMEWLGLSA
GMGAFLAGIM LANSSYRHQL ETDIEPFKGL LLGLFFMAVG MSMDLKLFLT DPLLILAILL
GMLLIKTLVL MLLGRVRHHT WRPSIALGLI LAEGGEFAFV LLSQAQLSSI VDDKIAQILV
LAIGLSMAVT PMIFTLFRAT KPKVVDTRLP DTINVTESEV VIAGFGRVGQ ITGRILASSG
IPFVALDKDA SHVDVIRQYG GEVYFGDARR LDMLMSAGIA RSRLLLLAVD SVEDSIEIAQ
QVKTHFPHIN IIARARDRNH AYRLMSLGVT DVFRETFGSA LSASEKILQG LGLSQVQANE
RVKIFAEHDK KLVIASAAHQ NDLAKLIDLS NKGKAELESL MRGDRENVS